Strain | Pseudomonas aeruginosa BWH030 adTwj-supercont1.7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGCCGAAGCTGCTGGAGCTGCACGCGGACATGCGGGTGGTGATCCTCACCGGCTATTCCAGCATCGCCACCGCGGTGGAGGCGATCAAGCGCGGCGCCTG CAACTACCTGTGCAAGCCGGCGGATGCCGATGACGTGCTGGCCGCGCTGCTCTCCGAGCACGCCGACCTGGACACCCTGGTGCCGGAAAACCCGATGTCG GTGGATCGCCTGCAATGGGAGCACATCCAGCGCGTGCTCGCCGAGCACGAGGGCAACATCTCCGCCACCGCCCGTGCCCTGGGCATGCATCGACGGACCT TGCAGCGCAAGCTGCAGAAGCGGCCGGTACGGCGCTGAAGCGTAAATGACAACGGGGGCGCCGCATGGCGCCCCCTGTGCTTTCCGTTTTCCGTCGAATC GCGGTGGATTTCGCAGATTCCGCCGGTCGCCGGGGATATCCAGCGGACAGCGCAATCGTTAAGATGCAGCTTTCATGAATCGCACGACCAGGGATTGATC
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DNA Sequence for Gene |
>AJ70_02813
ATGCGTATCTTCGGTTCGAGTGCCGGCTGCCTGTCGGTGCTGTTCGGACTGGCCTTCGGGCTGCCTGCACTAGCCGAGCCTTCGGTGGACCTGGATGGTC CGACGGCAGGCTGGCGCTATTCCGGCCTGCTCGAACAGCCCGATGCCCCGCGTGTCGCCTATCCGACTCCGCCCATCGATCGCGGCGGCCAGCGCGGCCG CAGCCTGATCGAAGGACACCTGCGCGAACTGGTCGGCACCGAGCGCGCCCAGCGCCTGGTGGTCAACGGCAATCCTCTCCCTCTCTATACCGACGGCGCC GGGCGCTTCGTCCGCCCCTATGCGTTCGGCCACGGCTCCAACGGCGTCCAGGTCGGCAGCGCCGACGGCAAGATCCTCAAGCGCGTACAGTTCTACGAGG CCAATCGCTCCCAACTGCCGCCGCGCGTGCGCGTGGTGCTGGGTTGGGACGATCCGAAGGCCGAGCTCGACCTGCATATCGTCACCCCCGATGGCCAGCA CGCCTACTGGGCGCATCCGCGCCTGAGCAACAGCGGCGGCCTCGATCCGGACGGCGTCGACGGGCCCGGCCCGGAGATGTTCACCATGGGCGCGCCGCTG CACGGCACCTACCTGATCTACGTGAACTACTGGGGCAACCTCAACAACCAGGGCTACAACTTCCAGGCCGGCAGCAACGTACAGGACGTGATCACCGCGC AGGTCAACCTGGTGTTCAACGAAAACAGCGTCGACGAGAAGCACGAGACCTTCGTCGTGCCCCTGCGCACCATCGGCGACCTGGTGCTGGTCAAGACCTT TACCTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCATCCCCTCGTACGGATGACACGGGATTAGCGAACCATGAGCGAGAACAACACCCCCAGCCCTGCCAACGGAACCCCTGCGCCCGCCGCTGCGCGCAC CCGAAGCGCCCTGTGGCCGGTGCTGGGGATCGTCGCCGCGCTGGCCGCCGGCGGTGTGCTGGCCTGGCAGATGGGCTGGCTGGAGCGGCTCGGCGGAGGG CGCCCGGCCGAAGAGGACCTCGGCCAGCCGATCGGCGCCCAGGCACCCGCGGACGCCGACGCGCCGCGTGCCTACCGTGACCTGCGCAAGCCCGACGCGC TGATCGAGAGCGTGTCGCTGAGCCGCCTGCCGAAGGAAATCCTCGAGGTGCCGTTGCTGCGCGATACCCTGACCGAGGACTTCGTTTTCTATTACGAGAA CAATGGCGACCGCCTTGGCCTGACCGGTACGTTGCGGCGGATCATCTACGAGCACGACCTGACCCTGAAGGACAGCCTGGTCGAGGAACTGCTCGACCAA
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Amino Acid Sequence |
>signal peptide protein
MRIFGSSAGCLSVLFGLAFGLPALAEPSVDLDGPTAGWRYSGLLEQPDAPRVAYPTPPIDRGGQRGRSLIEGHLRELVGTERAQRLVVNGNPLPLYTDGA GRFVRPYAFGHGSNGVQVGSADGKILKRVQFYEANRSQLPPRVRVVLGWDDPKAELDLHIVTPDGQHAYWAHPRLSNSGGLDPDGVDGPGPEMFTMGAPL HGTYLIYVNYWGNLNNQGYNFQAGSNVQDVITAQVNLVFNENSVDEKHETFVVPLRTIGDLVLVKTFTY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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