Pseudomonas aeruginosa 3580, AJ67_05755
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.26, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACACGTTCGGTCCAGCCTGGATCGGTGAGGTCGCACTCCACCACGCGGACCCGCTCGGCGAAACCGGCCAGCGCCGTACGCGCGATCTCCAGCAGCATG ACGTCGGCGTCCAGCGCCACCACCCGCGCCGCCGGGAAGCGTTCGAGCAGGCGCCGGCCGAGGGAGCCCGGGCCGCAGGCGGCGTCGATGGCGGTGAAGC GCCCGTCGCGGCCGAAGAGGTCTTCGAGCAACTGGAACATCGCCTCGTAGCGCTCCTCTCGCTGGCGGATGTAGCCCTCCTGCTGGCGGTCCCAGCGTTC CAGGAGCGCCATGATCTGCTCGGTTGCGGTCATCTTTCCTCCTGGGGGGCATGCCCGGTTGAGAGTGGGGTCCTGTGCTTCGAGGGATACGGCGAGCGAG ACGTTCCCTCGCCTCGACGAAGAAGAAACGGCGGGCATTCTTCATTCGAGAAAATGTTATGTTATAACTTATAAATATTCATAATTCATACCTGCCGACC
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| DNA Sequence for Gene |
>AJ67_05755
ATGACCCCCCATTCCTCCCCGCACCGTCTTCCTCCGCTGCGGCTGGCCCGCGCCGTGCCGTTCCTCTACCTGCTTCCCTGCCTGGCGCTGGCCGCGCCGG TCGACCTGGAGCCGACCGTGGTCAGCGCCACCACTACCGAGCGCAAGCTGCGCGACGCCCCGGCCAGCGTTTCGCTGATCACCGCCGAGGACCTGCGGCG GCGCCCGGTGCGCGACCTGCAGGAAGCCCTGCGCGGTTCGGAAAGCCTGCAGTTCAACGGCGTCGGCATGTCCCGGCGGGGCATCAGCGTTCGCGGCATG TCCAGCGAGCACACCCTGGTGCTGGTGGACGGCCAGCGGATCTCCACCTCGTCCGGGGCCATCGCCCATTCCGACTTCGACCTCGGCTGGGTGCCGGTGG AGAGCATCGAGCGTATCGAGGTGGTACGCGGACCGATGTCCTCGCTCTACGGTTCGGAAGCCCTCGGCGGGGTGGTGAACGTGATCACCCGGCGCGCCAC CGATACCTGGACGGGCAGCGGTCTGCTCGATGGCGGCGTGCGCGAGGACGGCCTCGGCGGGCAGAGCCACCAGCTCGGCGCCTATCTCGCCGGGCCGCTG GTGCCCGGCAAGCTGGGCCTCGCCCTGAACGGCGAGAGCCGCCGCCAGCAGGAAACCCCGGACGCCGATGAGCGCCGACTCTCCGAGCTGGAAGGCGGCA ACGCCGACAGCGGTGGGCTGAACCTCAGCTGGACCCCGGGCGACGCCCAGCGCATCGACCTCGGCCACCAGCGCGGGCGCGAACGACGCTGGCGCAACAG CGAGACCGGAGGGTCGCGCTCGCGCTACTACGAGTCGCGCGACGTGATCGAACGCGAGCGCTGGTCGCTCGCCCACAATGGCCAGTGGGACTGGGGCAGC AGCCAGCTGCGCACCTACCGCAACCGCCTGGAGCGGCACAACGCGCGTTCCGACGGACAACCGCCGAGCAACCCGCAGCGGCTTACCGACAGCGTGGTCG ACGGCCACCTCAGCGTGCCGGCCTTCGAGCGACATCTCTTCACCCTCGGCGGCGAATGGCGCAAGGAAGAACTGGAGGATCGCTCGGTGAATACCGCCGG CGACGCCAGCGCGCGACACAAGGCGCTGTTCCTGCAGGACGAGATCGCCTTCGGCCCGGACTGGTCGCTGACCCTCGGCAGCCGCTTCGACAAGCACGAG GCGTTCGGCTGGGAAAGCAGTCCGCGCCTGTACCTGCTGCACCACCTTTCCGATGCGCTGACCCTGCGCGCCGGCGTCGGCCGCGGCTACAAGGCGCCGA GCCTGAAGCAGCTATCGCCGGAGTATGCGGCGGTCGGTGGCGGCGGGCGCTTCACCATCTACGGCAATCCCGACCTGAAGCCGGAGACCAATACGTCCTA CGAACTGGGCGCCGACTACCAGGGCGATGGCTGGTCGCTGAAGGGCACGGTGTTCGAGAACGATGTCCGCGACCTGATCCAGACCGTCTGCGTAGCGCGC TGCGGGGTGCGCGGCGGCGAGATACGCAACTACGAGAACGTCGACAGGGCACGGATCCGCGGCCTCGAGCTGGGCGGCGGCGTGGACCTGCCGGCGGACC TGCGCTGGGAACTCAACTACACCTACCTCGACGCGCGCAACCGCACCGCCGGCCAGCGCCTCGGCGACCGCTCCCGGCACCTCGCCAACAGCCAATTGCG CTGGAGCCCCAATGCCCGCTTCAGCGCCCAGTTGCGCACCGAATACGTCGGCAGCCAGGTGGCCTACAGCAGCAACGTCGGCTACGCCTTGCCGGCCTAC AGCCTGTGGCACCTGGAGCTGAGCCAGAAACTCAGCGAGAACCTGACGCTGCGCGGCGGCATCGAGAACCTTGGCGACCAGCGCCTGGCCGACGACGACA CGCACTTCACCTATGCCGAACCTGGGCGGACCTTCCATCTCGGCCTGGTGGCGAGCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCGCCGTTCGCTACTCTTCTGCGGCGCGCTGCTGGCCAGTCTCTGTGCCTGGGCGGAGCCGGCCCAGGTGCGTCTGCTCAGCAGCGATTTCGTCCTCCC GGGCAAGCACCAGCGCCTAGCCGGTTGGGCGCGCGAGGCCGGTGTCGAGTTGCGCGGCCTGCGCCTCGGCATCGGCGAGGCGCCACCCGGCGAGTGGCTG GACGGCGGCAACCTGCTGATCCTCGACACGCCGCGGCCGACCGATCGCGCCCAGGTCGAGCAGGCGCTGGGCGAGCGCTTGCAAGGCGGGACGCAACCCT GGATCCGCGTCGGCGGCGGTCCGCCGGGTTTCGGCAACCTGCCGGCGGCGCTGGGCGGGCGCCTGGTCGGCTACTACGCGAACGGCGGCGAAGCCAACCT GCGCCGGCTGTTCGAGGCGGTCCGACGCTGGCATGCCGGCCTGCCCGTCGACGCGTTGCCGGCGCCGCAGCCCCTGGCGCAGGCCGGCTTCTATCATCCC
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| Amino Acid Sequence |
>TonB-denpendent receptor
MTPHSSPHRLPPLRLARAVPFLYLLPCLALAAPVDLEPTVVSATTTERKLRDAPASVSLITAEDLRRRPVRDLQEALRGSESLQFNGVGMSRRGISVRGM SSEHTLVLVDGQRISTSSGAIAHSDFDLGWVPVESIERIEVVRGPMSSLYGSEALGGVVNVITRRATDTWTGSGLLDGGVREDGLGGQSHQLGAYLAGPL VPGKLGLALNGESRRQQETPDADERRLSELEGGNADSGGLNLSWTPGDAQRIDLGHQRGRERRWRNSETGGSRSRYYESRDVIERERWSLAHNGQWDWGS SQLRTYRNRLERHNARSDGQPPSNPQRLTDSVVDGHLSVPAFERHLFTLGGEWRKEELEDRSVNTAGDASARHKALFLQDEIAFGPDWSLTLGSRFDKHE AFGWESSPRLYLLHHLSDALTLRAGVGRGYKAPSLKQLSPEYAAVGGGGRFTIYGNPDLKPETNTSYELGADYQGDGWSLKGTVFENDVRDLIQTVCVAR CGVRGGEIRNYENVDRARIRGLELGGGVDLPADLRWELNYTYLDARNRTAGQRLGDRSRHLANSQLRWSPNARFSAQLRTEYVGSQVAYSSNVGYALPAY SLWHLELSQKLSENLTLRGGIENLGDQRLADDDTHFTYAEPGRTFHLGLVASF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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