Pseudomonas aeruginosa 3580, AJ67_05751
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.26, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCGCCAGCATCACCTTCTTCATCCTTACCGTGCGTCGCCGCTGGCTGCTCCAGGAACTGCGCGCCGTCGAACGTGCGCGGGAGGCCGGCTGATGCGCT TCCTCGAACACGACGAGGCGGACGACCCGATCCTCTCGATGGTCAACCTGATCGACCTGTTCCTGGTGGTGATCGGCATCCTCCTGATCGTCATCGTGCA GAACCCGCTCAACCCATTCAGCCAGGACAAGGTGGTGGTGGTCGAGAACCCCGGCGAGGCGGACATGCGCATGCTGGTCAAGGACGGCAAGGAGCTGAAG CGCTACCAGGCCAGCGGCGAGATCGGCGAAGGGCAGGGCAGCCGCGCCGGAGTGACCTACCGCTTGGCCGACGGACGGATGATCTACGTGCCGGAGAGCG GCGGGGAGGCCGGCAAGTAGCGACGCGTACGGCGGAGAGCTGGGACTTTTGCCCGGAGTTCCCGGATAATGGCCGGTTTCCGTTTCTCTTGGTGCTCGCC
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| DNA Sequence for Gene |
>AJ67_05751
GTGGAAGTAAAGGTCAATTTTCTCGATAACCTTCGACTGGAAGCCAGGTTCGATGATTTCACGGTGATCGCCGACCAGCCGATCCGCTACAAGGGCGACG GCTCCGCGCCGGGGCCGTTCGACTACTTCCTGGCGTCGTCGGCGCTGTGTGCCGCCTACTTCGTCAAGCTGTACTGCCAGACGCGCAACATCCCCACCGA CAACATACGCCTGTCGCAGAACAACATCGTCGACCCGGAGAACCGCTACCGGCAGATCTTCAAGATCCAGGTGGAACTGCCGGCCGACATCTCGGAGAAG GACCGCCAGGGCATCCTCCGCTCCATCGACCGTTGCACGGTGAAGAAGGTGGTGCAGACCGGACCCGAGTTCGTCATCGAGGAGGTCGACAACCTCGATG CCGACGCCCAGGCGCTGCTGATGCCCGGCACCGATGCCGCCGGCTGCACGCGCATCCCGGGCAAGGACCTGCCGCTGGAGCAGACCATCGCCAACCTGTC GGCCATCCTCGCCGGCCTCGGCATGAAGATCGAGATCGCCTCCTGGCGCAACATCGTGCCCAACGTCTGGTCGCTGCACATCCGCGATGCGCAGTCGCCG ATGTGCTTCACCAACGGCAAGGGCGCGAGCAAGGAAAGCGCGCTGGCCTCGGCGCTGGGCGAATTCATCGAGCGGCTGAACTGCAACTTCTTCTACAACG ACCAGTACTGGGGAGAAGAGATCGCCAATGCGGCGTTCGTCCATTACCCGGACGAACGCTGGTTCAAGCCCGGCCGCGACGATGCGCTGCCGCTGGGACT GCTCGACGGCCATTGCCTGGCGATCTACGACCCCGACGGCGAGCTGCGCGGCTCGCACCTGTACGACACCAACTCGGGCAACGTGCAGCGCGGTATCTGC GCCTTGCCCTTCGTGCGCCAGTCCGACGGCCAGGTGGTGTATTTCCCCTCCAACCTGATCGAGAACCTCTACCTCAGCAACGGCATGAGCGCCGGCAATA CCCTGGCCGAGGCGCAGGTGCAGTGCCTGTCGGAGATCTTCGAGCGCGCGGTCAAGCGGCAAATCCTCGAAGGCGAACTGGCGCTGCCGGACGTGCCGCC GGAGGTGCTGGCCAAGTACCCGGGCATCCTCGCCGGGCTCCGCGGCCTGGAAGAGCAGGGCTTCCCGGTACTGGTCAAGGACGCCTCCCTGGGCGGCGAA TTCCCGGTGATGTGCGTGACCCTGATGAATCCGCGCACCGGTGGCGTGTTCGCTTCCTTCGGCGCCCACCCGAGCTTCGAGGTGGCCCTGGAGCGCAGCC TGACCGAACTGCTCCAGGGGCGCAGCTTCGAAGGCCTGAACGACCTGCCCCAGCCGACCTTCGAAAGCCATGCGCTGACCGAGCCGAACAACTTCGTCGA GCATTTCATCGACTCCAGCGGCGTGGTGTCCTGGCGCTTCTTCAGCGCCAAGGCCGATTTCCCGTTCGTCGAGTGGGACTTCACCCGGCAGGGCGAGGCT GCCAACGCCGAGGAAGCCGCGACCCTGTTCGGCATCCTCGAAGCCATGGGCAAGCAGGTCTACATGGCGGTGTACGAGCACCTCGGCGCTACGGCCTGCC GGATCCTGGTGCCGGGCTACTCGGAAATCTATCCGGTGGAAGACCTGATCTGGGACAACACCAACAAGGCCCTGGCGTTCCGCGAGGACATCCTCAACCT GCACCGCCTCGACGATGCTGCGCTCGGGGCGTTGCTGGAGCGCCTGGAAGACTGCGAGGTGGACGACTACACCGACATCACCACGCTGATCGGCGTCGAG TTCGACGACAACACGGTCTGGGGCCAACTGACCATCCTCGAGCTGAAAGTGCTCATCGGCCTCGCCCTGAAGCGCTTCGAAGACGCCAAGGAAGGCGTGG AGGCGTTCCTCCAGTACAACGACAACAGCGTCGAGCGCGGCCTGTTCTACCAGGCGCTGAACGTGGTGCTGGAGGTCGTCCTCGACGACGAGCTGGAGAT CGCCGACTACGAGGCCAATTTCCGCCGCATGTTCGGCGACGCGCGGATGGATGCCGCGCTGGGCTCGGTGGACGGCAGCGTGCGCTTCTTCGGCCTGACG CCGACCAGCATGAAGCTGGAAGGGCTCGACCGGCACCTGCGGCTGATCGACAGCTACAAGAAGCTGCACGCGGCGCGAGCCAGGATGCAGCCCGTGGTCG ACGGCGAGGCCGGCGCTGCCGCGGCTGGCGGCCTCAAGCCTCGGCGCATGGCGATCCGCAAGCGCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGGGCGCCGAGGTCAGGGTGCGAGGATGATCATGAGGGAAACTTGATTTCATCACGAAGAAATTGAGTTTGTCTCATGGCATGAGTCTCCCGAGAATC CCTCCATCGACCTTTCGACTGGAGGAACACCCATGGCCCTGGCCCACACTCTCGGCTTCCCACGCATCGGACGCGATCGCGAACTGAAAAAAGCCCAGGA AGCGTTCTGGAAGGGCGAGCTGGACGAGGCCGGCCTGCGGGCCGTCGGCCGGCAGCTGCGCGCCGCCCACTGGCAGGTACAGAAGGACGCCGGCATCCAG TTGCTGCCGGTCGGCGATTTCGCCTGGTATGACCAGGTGCTGACCCATTCGCTGACCTTCGGCGTGATCCCCGAGCGCTTCCGGGCGCACGGCGAGGCCG GGCCGACCCTGCATACCCTGTTCGGCATGGCCCGTGGCGTCAGCGACGACAGTTGTTGCGGCGGTGCCCATGCCCAGGAAATGACCAAGTGGTTCGACAC
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| Amino Acid Sequence |
>protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
MEVKVNFLDNLRLEARFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQTRNIPTDNIRLSQNNIVDPENRYRQIFKIQVELPADISEK DRQGILRSIDRCTVKKVVQTGPEFVIEEVDNLDADAQALLMPGTDAAGCTRIPGKDLPLEQTIANLSAILAGLGMKIEIASWRNIVPNVWSLHIRDAQSP MCFTNGKGASKESALASALGEFIERLNCNFFYNDQYWGEEIANAAFVHYPDERWFKPGRDDALPLGLLDGHCLAIYDPDGELRGSHLYDTNSGNVQRGIC ALPFVRQSDGQVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKRQILEGELALPDVPPEVLAKYPGILAGLRGLEEQGFPVLVKDASLGGE FPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRFFSAKADFPFVEWDFTRQGEA ANAEEAATLFGILEAMGKQVYMAVYEHLGATACRILVPGYSEIYPVEDLIWDNTNKALAFREDILNLHRLDDAALGALLERLEDCEVDDYTDITTLIGVE FDDNTVWGQLTILELKVLIGLALKRFEDAKEGVEAFLQYNDNSVERGLFYQALNVVLEVVLDDELEIADYEANFRRMFGDARMDAALGSVDGSVRFFGLT PTSMKLEGLDRHLRLIDSYKKLHAARARMQPVVDGEAGAAAAGGLKPRRMAIRKRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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