Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.21, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGATCTTCCGCGCCCGCCAGTTGCGCCAGGACGCCCAGCAGCAACGCCACGCCGAACTGCTCGGTCGTCTGCTCGCCTAAATCGGCTCTTCCATAAAGAT TGGCGATTTTTTAGACTATTCAGTCCGCCCGGCAAACGTCGGGCTCACTTTTCGTTACGAGGAACACCATGGCCCGCGTCACCGTTGAAGACTGCCTGGA CAACGTCGATAACCGTTTCGAGCTGGTCATGCTCGCCACCAAGCGCGCCCGTCAGCTGGCTACCGGCGGCAAGGAGCCGAAAGTGGCCTGGGAAAACGAC AAGCCGACCGTCGTCGCCCTGCGCGAGATCGCTTCCGGCCTGGTCGATGAGAACGTCGTCCAGCAGGAAGACATCGTCGAGGACGAACCGCTGTTCGCAG CGTTCGACGACGAGGCCAACACCGAGGCCCTGTAAGCCATGGCCTCGGCTCGACGTCGCCTGCGAGCGCCGCAACCCGCCTACGGGCAGGGGGTGAACCC
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DNA Sequence for Gene |
>AJ67_05316
TTGCCGGGCATAGACGCCTTCGCCGACAGACTGTCGAGCTACCTCGGGCCGGACCAGGTCAACCTGGTCCGCCGCGCCTACTACTACGCCGAGCAGGCCC ACGACGGGCAACGCCGCCGCAGCGGCGAACCGTACGTGACCCACCCGCTGGCGGTCTCCAACATCCTCGCCGACATGCACATGGACCATCAGAGCCTGAT GGCCGCGATGCTGCACGACGTGATCGAGGACACCGGCATCGCCAAGGAAGCGCTCACCGCGCAGTTCGGCGAGACGGTTTCGGAACTGGTCGACGGGGTC AGCAAGCTGACCCAGATGAACTTCGAGACCAAGGCCGAGGCCCAGGCCGAGAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGACATCCGCGTGATCC TGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTCGAGGTGCTGTCCGGCGAAAAGCGCCGGCGCATCGCCAAGGAAACCCTGGAAATCTACGC GCCCATCGCCAACCGCCTGGGCATGCACACCATGCGCGTGGAGTTCGAGGACCTAGGTTTCAAGGCCATGCACCCGATGCGCGCCGAGCGCATCCGCCAG GCGGTGAAGAAGGCCCGCGGCAACCGCCGCGAGATCGTCGGCAAGATCCAGGAGTCGCTGGTCAACTGCCTCGCCCGGGAAGGCATGGAAGGCCAGGTGA TAGGCCGCGAGAAGCACCTCTACAGCATCTACCAGAAGATGCGCGGCAAGCGTAAGGCGTTCAACGAGATCATGGACGTCTACGCCTTCCGCATCATCGT CGACAAGGTCGATACCTGCTATCGCGTGCTGGGCGCCGTGCACAGCCTGTACAAGCCGTTCCCCGGACGCTTCAAGGACTACATCGCGATTCCCAAGGCC AACGGCTACCAGTCGCTGCATACCACCCTGTTCGGCATGCACGGGGTGCCCATCGAGATCCAGATCCGTACCCGCGAGATGGAAGAGATGGCCAACCACG GGATCGCCGCGCACTGGCTGTACAAGTCCAACGACGAGACGCCCAAGGGCACCCATGCCCGCGCCCGGCAATGGGTGAAGGGCGTGCTGGAACTGCAGCA GCGCGCCGGCAACTCGCTGGAATTCATCGAGAACGTGAAGATCGACCTGTTCCCGGACGAGGTCTACGTGTTCACGCCCAAGGGCCGCATCATGGAACTG CCCAAGGGTTCCACCGCGGTCGACTTCGCCTACGCGGTGCACACCGACGTCGGCAATAGTTGCATCGCCTGCCGCATCAACCGTCGCCTGGCGCCGCTCT CCGAGCCGTTGCAGAGCGGCCAGACGGTGGAAATCGTCACCGCCCCGGGCGCCCGGCCGAACCCGGCCTGGCTGAGCTTCGTGGTCACCGGCAAGGCGCG CACCCATATCCGCCATGCGCTCAAGCTGCAACGCCGCTCCGAGTCGATCAACCTCGGCGAGCGCCTGCTGAACAAGACCCTTACCGGCTTCGACAGCCAC CTCGAGAAGATTCCCCAGGAACGCATCCAGGCCGTGCTCGCCGAGTACCGCATGGAAGTCTTCGAGGACCTGCTGGAAGAGATCGGCCTGGGCAACCGCA TGGCCTACGTGGTCGCCCGCCGCCTGCTGTCCAGCGAGGGCGAGGAAGCGCCAAGCGCCGAGGGTCCGCTGGCGATCCGCGGCACCGAAGGCCTGGTCCT GAGCTACGCCAAGTGCTGCACGCCGATTCCCGGCGACCCGATCGTTGGCCACCTGTCCGCCGGCAAGGGCATGGTGGTGCACCTGGAAAGCTGCAAGAAC ATCAGCGAAGTACGCCACAACCCGGAAAAATGCATCCAGCTCAGCTGGGCCAAGGATGTCACCGGCGAATTCAATGTCGAACTACGCGTCGAGCTGGAGC ACCAGCGTGGCCTGATCGCCCTGCTCGCCACCAGCGTCAACGCGGCCGACGGCAACATCGAGAAGATCAGCATGGACGAGCGCGACGGTCGCATCAGCGT GGTCCAGCTGGTCGTCAGCGTGCACGATCGCGTCCACCTGGCCCGCGTCATCAAGAAGCTGCGCGCCCTCAAGGGAGTGATCCGGATCACCCGCCTGCGT AGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGCTTTTTCCTGTGTCATCCGGCGCCCCCGCGCCCACTCGATTTCAGCAAGGAGTTCCCATGACCAAGACCGTTATCCACACCGACAACGCCCCGGCC GCCATCGGCACCTACTCCCAGGCCATCAAGGCCGGCAATACCGTCTACGTGTCCGGGCAGATCCCGCTGGACCCGAAGACCATGGAACTGGTGGAAGGCT TCGAGGAGCAGACCGTCCAGGTGTTCGAGAACCTCAAGGCGGTGATCGAGGCTTCCGGCGGCTACCTGCACGACGTCGCCAAGCTGAACATCTTCCTCAC CGACCTGTCGCACTTCGCCAAGGTCAACGAGATCATGGGCCGCTACTTCACCCAGCCCTACCCGGCGCGCGCCGCTATCGGCGTAGCCGCCCTGCCGAAG GGCGCACAGGTGGAAATGGACGCCATCGTCGTCCTCGAATAAGCCGGATGTTCGCGACGGGGCCCAAGGCCCCGTCGCTCTGCATGGAGTAGCACGATGC
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Amino Acid Sequence |
>bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
MPGIDAFADRLSSYLGPDQVNLVRRAYYYAEQAHDGQRRRSGEPYVTHPLAVSNILADMHMDHQSLMAAMLHDVIEDTGIAKEALTAQFGETVSELVDGV SKLTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHTMRVEFEDLGFKAMHPMRAERIRQ AVKKARGNRREIVGKIQESLVNCLAREGMEGQVIGREKHLYSIYQKMRGKRKAFNEIMDVYAFRIIVDKVDTCYRVLGAVHSLYKPFPGRFKDYIAIPKA NGYQSLHTTLFGMHGVPIEIQIRTREMEEMANHGIAAHWLYKSNDETPKGTHARARQWVKGVLELQQRAGNSLEFIENVKIDLFPDEVYVFTPKGRIMEL PKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGQTVEIVTAPGARPNPAWLSFVVTGKARTHIRHALKLQRRSESINLGERLLNKTLTGFDSH LEKIPQERIQAVLAEYRMEVFEDLLEEIGLGNRMAYVVARRLLSSEGEEAPSAEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLESCKN ISEVRHNPEKCIQLSWAKDVTGEFNVELRVELEHQRGLIALLATSVNAADGNIEKISMDERDGRISVVQLVVSVHDRVHLARVIKKLRALKGVIRITRLR S
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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