Pseudomonas aeruginosa 3580, AJ67_05227
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.20, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCCACCGGCGCCCTGGCCGACGCCATCAACGCCGCCTTCGGCTCCTTCGACAAGTTCAAGGAAGAGTTCACCAAGACTTCCGTCGGCACCTTCGGTTC CGGCTGGGGCTGGCTGGTGAAGAAGGCCGACGGCTCCCTGGCCCTGGCCAGCACCATCGGTGCCGGCAACCCGCTGACCAGCGGCGACACCCCGCTGCTG ACCTGCGACGTCTGGGAACACGCCTACTACATCGACTACCGCAACCTGCGTCCGAAGTACGTCGAGGCGTTCTGGAACCTGGTCAACTGGGACTTCGTAG CGAAGAATTTCGCTGCCTGAGTCTGATCAGAACCACGAAAAAGCCCGGCATTCGCCGGGCTTTTTCGTTTTAATCTGCGGTCCAGGAGCCATCGTCTACC CTCAGGAACTGGTAGACCTTCGCTCGTGATAGCCTCTTGAGGTAAACAAGCTCTTCCTACCGGCTTGTCTTTCGCCCTGGCGACGAACAAGGAAGGCCCC
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| DNA Sequence for Gene |
>AJ67_05227
TTGAAACTGGACTCCCGACACAGCCTCTCGCTCAAGCTGCTGCGTGTCGTGCTACTGGCGGCGCTAGCCGTTGGCGTAGTGCTCAGTTGCGCGCAGATCG TCTTCGACGCCTACAAGGCCAAGCAGGCGGTGAGCAGCGACGCCCAACGCATCCTCGCGATGGTCCGCGACCCTTCCACCCAGGCGGTCTACAGCCTCGA CCGGGAAATGGCGATGCAGGTCCTCGAAGGCCTGTTCCAGCACGAGGCGGTGCGCCAGGCGAGCATCGGCCATCCCGGCGAGCCGATGCTGGCGGAGAAA TCCAGGCCGCTGCTGGACCTGCCGACGCGCTGGCTGACCGACCCGATCCTCGGCCAGGAACGCACCTTCAGCATTCGACTGATCGGCCGCCCGCCCTATA GCGAATACTACGGCGACCTGAAGATCACCCTGGACACCGCGCCCTACGGCGAGAACTTCGTCACCACTTCGGAAATCATCTTCATCTCCGGCATTCTCCG CGCCCTGGCCATGGGCCTGGTGCTGTTCCTGGTCTACCACTGGATGCTGACCAAGCCGCTGTCGAAGATCATCGAACACCTGGTCAGCATCAATCCCGAC CGCCCCAGCCAGCACCAGTTGCCGCTGCTCAAGGGGCACGAACGCAACGAGCTGGGGCTCTGGGTGACCACCGCCAACCAGTTGCTCGCCTCGATCGAAA GCAACAGCCACCTGCGCCGCGAGGCCGAGGACAACCTGCTGCGCATTTCCCAGTACGACTTCCTCACCGGCCTGCCGAACCGCCAGTTGCTGCAGCAGCA ACTCGACCAGATCCTCGACGGCGCCGGCCGCCAGCAGCGCCGGGTGGCAGTGCTGTGCCTGGGCCTCGACGATTTCAAGGGGATCAACGAGCAGTACACC TACCAGCTCGGCGACCAGTTGCTGATCGCCCTCGCCGACCGCCTGCGCGGGCACAGCGCGCGGCTCGGTTCGCTGGCGCGCCTGGGCGGCGACCAGTTCG CCCTGGTCCAGGCCGACATCGAGCAACCCTACGAGGCGGCCGAACTGGCGCAGAGCATCCTCGACGGCCTGGAAGCGCCGTTCGAGATCGACCAGCACGA GGTGCGCCTGCGCGCCACCATCGGTATCACCCTGTTCCCCGAGGACGGCGAGACCACGGAGAAACTGCTGCAGAAGGCCGAGCAGACCATGACCCTGGCC AAGACCCGCTCGCGCAACCGCTACCAGTTCTACATCGCCAGCGTGGACAGCGAGATGCGTCGCCGCCGGGAACTGGAAAAGGACCTGCGCGACGCCCTGC AGCGCCACGAGCTGCACCTCGTCTACCAGCCGCAGGTGGACTACCGCGACCACCGCGTGGTCGGCGTCGAGGCGCTGCTGCGCTGGCAACATCCGTTGCA CGGCTTCGTCCCGCCGGACCTGTTCATCCCGCTGGCGGAACAGAACGGCAGCATCTTCAGCATCGGCGAGTGGGTGCTCGACCAGGCCTGCCGGCAGTTG CGCGAATGGCACGACCAGGGCTTCGACGACCTGCGCATGGCGGTCAATCTTTCCACCGTGCAGCTCCACCACAACGCCCTGCCACGGGTGGTCAGCAACC TGCTGCAGGTCTACCGCCTGCCGGCGCGCAGCCTGGAGCTGGAAGTCACCGAGACCGGCCTGATGGAGGACATCTCCACTGCCGCCCAGCACCTCCTCAG CCTGCGCCGCGCCGGCGCGCTGATCGCCATCGACGATTTCGGCACCGGCTATTCCTCGCTGAGCTACCTGAAGAGCCTGCCGCTGGACAAGATCAAGATC GACAAGAGTTTCGTCCAGGACCTGCTGCAGGACGAGGACGACGCGACCATCGTTCGCGCCATCATCCAGCTCGGCAAGAGCCTGGGCATGCAGGTGATCG CCGAGGGCGTGGAAACCGCCGAGCAGGAGGCGTACATCATCGCCGAAGGTTGCAACGAAGGTCAGGGCTACCTGTACAGCAAGCCGCTGCCGGCCAGGGA ACTGACCCAGTACCTCAAGCAGGCGCGACGCCTGAGCCAGGCCACCAGCAGCGAACGGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAGAACAGGCGGCTGAACAGCCAGCCCGCCAATAGCGCGCTGCCCAGGCAGAGCAACGCGGCCCCCGCCGCCTGGCGGCGCAGTTGCACGGCGAGATCG TCCTCGCCCTGGCTGGAGAGAATGAAGGGATGCGCCTCCCCCGGCTTGCCGAGCCGGTGGCGGGTCGGCGCGGCGCTGCTTGCCCGATGCCGATCCTCGG CCTCCAGCCGTGCCGCCAGGCGCACCCGGTTCCATTCGCGCTCGTCCAGCTCGCCGTTGCCGTCGCTGTCGAAGCGCGCCAGCAGGCCGTGGAAATCGCC CTTCCATTCACGGATCACCGCACCCTGCGCCCGTTCGGCATCGAGTCCCTGGCGACCGCCACCGCTGCTGCGGAATTCGCCCAGCGCATAGAGCGGCTCG CCGGCATGCAGGCGCTCCTCGGTGTAGCGGTAGAGCCGCTCTCCGCCGACCAGGGTGCCGAAGCTCTCCAGCAGTCGCAGGGTATCGATCGGTGCTTCGC
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| Amino Acid Sequence |
>diguanylate cyclase
MKLDSRHSLSLKLLRVVLLAALAVGVVLSCAQIVFDAYKAKQAVSSDAQRILAMVRDPSTQAVYSLDREMAMQVLEGLFQHEAVRQASIGHPGEPMLAEK SRPLLDLPTRWLTDPILGQERTFSIRLIGRPPYSEYYGDLKITLDTAPYGENFVTTSEIIFISGILRALAMGLVLFLVYHWMLTKPLSKIIEHLVSINPD RPSQHQLPLLKGHERNELGLWVTTANQLLASIESNSHLRREAEDNLLRISQYDFLTGLPNRQLLQQQLDQILDGAGRQQRRVAVLCLGLDDFKGINEQYT YQLGDQLLIALADRLRGHSARLGSLARLGGDQFALVQADIEQPYEAAELAQSILDGLEAPFEIDQHEVRLRATIGITLFPEDGETTEKLLQKAEQTMTLA KTRSRNRYQFYIASVDSEMRRRRELEKDLRDALQRHELHLVYQPQVDYRDHRVVGVEALLRWQHPLHGFVPPDLFIPLAEQNGSIFSIGEWVLDQACRQL REWHDQGFDDLRMAVNLSTVQLHHNALPRVVSNLLQVYRLPARSLELEVTETGLMEDISTAAQHLLSLRRAGALIAIDDFGTGYSSLSYLKSLPLDKIKI DKSFVQDLLQDEDDATIVRAIIQLGKSLGMQVIAEGVETAEQEAYIIAEGCNEGQGYLYSKPLPARELTQYLKQARRLSQATSSERP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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