Pseudomonas aeruginosa 3580, AJ67_04397
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGAGACCACCAGGCCCATCTGCCCATTGGCAGAGACCGTCACTTCGCGATACGGCCCCTTGCGTTCGTGGACGCAATGCTCGTTGCGGGTCAGCGCCA TGATCGGCCCCAGTTCGCCGAGCGCCGGCAGCAAGGCGGCCCAGTCCGGCCGCAGGCGCACGGCATCGATGCCGACCCGGCTGGCGACCAGCTCGCCTTC GCTGACCTGCAACAGCGCGGCGGCGTCGCGCGCGCGTAGCTGCGGTCGCTCGGCGCGCAGGTCCTGCCAGGCGCGGTAAAGCTCGGCAGGGGAATGGGAA AGGCTGGGAGTGCTGCTCATCGACGGTTCCTCGGGCATATCCGGTTCGGTCGCGCTACGCGCAAAAACAGGTGAACTTTGCCACAAAACGCATATCTGAA TCCATTTGATAATTATTTGCATTAGCGTTTTTCTGGCAGTACCTTGTGCGCCCGACGTCCCCCTGGCTATTCGCCACCGGCCCGACCCAAGGAGTCCCAC
|
|
| DNA Sequence for Gene |
>AJ67_04397
ATGCCGCTCTCCCCGCCCTTCGCCCTGCGCCCCTGCCTGGCCCTGCTGTTGCTCAGCCCTTCCCTGGCCCTGGCGGGGAACGCCGTCCCGCTGACCCCGA CCACCATCACCGCCACCCGTACCGAGCAGGCAGTGGATTCGGTGCCAAGCACCGTCAGCGTGCAGACCCGCGAACAACTGGACCGGCAGAACGTCAACAA CATCAAGGAACTGGTGCGCTACGAACCGGGAGTCTCGGTCGGCGGCGCCGGCCAGCGTGCCGGGATCACCGGCTACAACATCCGCGGCATCGACGGGAAC CGCATCCTTACGCAGATCGACGGGGTCGAACTGCCCAACGACTTCTTCAGCGGCCCCTACGCGCAGACCCACCGCAACTACGTCGATCCGGACATCGTAA AGCGCGTGGAAATCCTTCGCGGCCCGGCCTCGGCGCTGTACGGCAGCAACGCCATCGGCGGCGCGGTGAGCTACTTCACCCTCGACCCGTCGGACATCAT CAAGGACGGCAAGGACGTCGGCGCCCGGCTGAAGGCCGGCTACGAGTCGGCCAGCCACTCCTGGTTGACCTCGGCCACCGTCGCCGGCCGCGCCGACGAC TTCGACGGCCTGCTGCATTATGGCTACCGCCAGGGCCACGAGACCGAATCCAACGGCGGCCACGGCGGCACCGGGCTCTCGCGCAGCGAAGCCAACCCGG AAGACGCCGACAGCTACAGCCTGCTCGGCAAGCTGGGCTGGAACTACGCCGAGGGCAGCCGCTTCGGGCTGGTCTTCGAGAAGTACAAGAGCGACGTCGA TACCGACCAGAAGAGCGCCTATGGCGGCCCGTACGACAAGGGCAAGCCGGCCATTCCGCCGAGCATGCTGCCGGGCGGCATGTACCAGTGGCGCAAGGGC AACGACACCCTGACTCGCGAGCGCTACGGCCTGGAGCACCATTTCCTGCTCGACAGCCCGGTCGCCGATCGCATCCAATGGAGCCTGAACTACCAGTTGG CGAAGACCGACCAGGCGACCCGCGAGTTCTACTACCCGATCACCCGCAAGGTCCTGCGTACCCGCGACACTACCTACAAGGAACGCCTGTGGGTCTTCGA CAGCCAGTTGGACAAGAGCTTCGCCATCGGCGAGACCGAGCACCTGCTGAGCTACGGGATCAATCTCAAGCACCAGAAGGTCACCGGCATGCGCAGCGGC ACCGGCACCAACCTGGACACCGGCGCGGACAGCCCGCGCGATGCCCTGGAACGCAGCAGCGACTTTCCCGATCCGACGGTGAAGACCTACGCCCTGTTCG CCCAGGACAGCATCAGCTGGAACGACTGGACCTTCACTCCCGGCCTGCGTTACGACTACACGCGCATGGAGCCGCACATCACCGACGAGTTCCTGCGCAC CATGAAGCAGAGCCAGAACACCGCGGTCGACGAGTCGGACAAGAAATGGCACCGGGTTTCGCCCAAGTTCGGCGTGACCTACGACTTCGCCCAGCACTAC ACCTGGTACGGCCAATACGCCCAGGGCTTCCGCACGCCCACCGCCAAGGCGCTGTACGGTCGATTCGAGAACCTGCAGGCGGGCTACCACATCGAGCCTA ACCCCGACCTCAAGCCGGAAAAGAGCCAGAGCTTCGAGACCGGGTTGCGCGGCAAGTTCGACGAAGGCAGCTTCGGCGTAGCAGTGTTCTACAACAAATA TCGCGACTTCATCGACGAAGACGCCCTGAATACCGATAGCACCGGCGGCAACGGCCAGACCTTCCAGTCCAACAACATCGAGCGGGCGGTGATCAAGGGC GTCGAGCTCAAGGGCCGCCTGGAGCTGGGCGCCTTCGGCGCGCCGCAGGGACTCTACACCCAGGGCAGCGTGGCCTACGCCTACGGTCGCAACAAGGACA ACGGCGAGCCGATCAACAGCGTCAACCCACTTACCGGAGTGTTCGGCCTGGGCTACGACGAAGCAGACGGCAACTACGGCGGGCTGCTCAGCTGGACCCT GGTCAAACGCAAGGATCGCGTCGACGACAGCACCTTCCACACCCCGGATGGCACCGCCAGCCAGTTCAAGACCCCGGGCTTCGGCGTCCTCGACCTCAGC GCCTACTACAGGCTGAGCAAGGACCTGACCCTCAACGCCGGTCTCTACAACCTGACCGACAAGAAATACTGGCTGTGGGATGACGTGCGCGGCTACGACA GCGTCGGCGAGGCTTCGGCGCTGGCCCCGGCTAACATCGACCGACTGTCCCAGCCAGGCCGCAATTTCGCGGTCAACCTGGTCTGGGACATCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCGTTACCCCTTCGCACACGGAAGTGCCCCCATACCCAGCGCCTGGCCATGCCGGGCGCTTTCCATGCCACAGGTGAAAGCCGTCCTCCGGATCAGGGA TAATGATCCCGGCAAACGGAGCGCCCATGATCCACCTGTGTCCCTCTTCCCATCTCGCCGAAGGCAACAGCCGCGGCTTCCTCGTCGATGAGCGGCGGCT GTTCGCGGTGCGTCGCGACGGCCGCGCCTACATCTACCTGAACCGCTGCCCGCATCGCGGCATCCCGTTGGAGTGGCAGCCCGATGCCTTCCTCGACGAC AGCGCCAGCCTGATCCGTTGCGCCAGCCACGGCGCGCTGTTCCTCATCGAGTCCGGCGAGTGCGTCGCCGGCCCCTGCGCTGGCGAGCGCTTGCGCGCCC TGCCCTGCCGGGAAGACGCCGAAGGCCTCTGGGTGGAGCTGGACGACTGACCCAACGGGGGATGGGCGGCAAGCCGCGAGGCAACGGCTAGGCTTGCGGC
|
|
| Amino Acid Sequence |
>TonB-denpendent receptor
MPLSPPFALRPCLALLLLSPSLALAGNAVPLTPTTITATRTEQAVDSVPSTVSVQTREQLDRQNVNNIKELVRYEPGVSVGGAGQRAGITGYNIRGIDGN RILTQIDGVELPNDFFSGPYAQTHRNYVDPDIVKRVEILRGPASALYGSNAIGGAVSYFTLDPSDIIKDGKDVGARLKAGYESASHSWLTSATVAGRADD FDGLLHYGYRQGHETESNGGHGGTGLSRSEANPEDADSYSLLGKLGWNYAEGSRFGLVFEKYKSDVDTDQKSAYGGPYDKGKPAIPPSMLPGGMYQWRKG NDTLTRERYGLEHHFLLDSPVADRIQWSLNYQLAKTDQATREFYYPITRKVLRTRDTTYKERLWVFDSQLDKSFAIGETEHLLSYGINLKHQKVTGMRSG TGTNLDTGADSPRDALERSSDFPDPTVKTYALFAQDSISWNDWTFTPGLRYDYTRMEPHITDEFLRTMKQSQNTAVDESDKKWHRVSPKFGVTYDFAQHY TWYGQYAQGFRTPTAKALYGRFENLQAGYHIEPNPDLKPEKSQSFETGLRGKFDEGSFGVAVFYNKYRDFIDEDALNTDSTGGNGQTFQSNNIERAVIKG VELKGRLELGAFGAPQGLYTQGSVAYAYGRNKDNGEPINSVNPLTGVFGLGYDEADGNYGGLLSWTLVKRKDRVDDSTFHTPDGTASQFKTPGFGVLDLS AYYRLSKDLTLNAGLYNLTDKKYWLWDDVRGYDSVGEASALAPANIDRLSQPGRNFAVNLVWDI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|