Pseudomonas aeruginosa 3580, AJ67_04264 (fliN)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGCAGGCGGTGCTGGAGATGAACTTCGAGTACGTCAACTCGGAGGTCAACCCGGCCATGGCCAACATCGTCAGTCCCAGCGAGGTGGTGGTGGTCTC CACCTTCCACATCGAACTGGACGGCGGTGGCGGCGACCTGCACATCACCATGCCCTACTCGATGATCGAGCCGATCCGCGAGATGCTCGACGCCGGTTTC CAGTCCGACCACGACGACCAGGACGAGCGCTGGATCAAGGCCCTGCGCGAGGACGTGCTGGACGTCCAGGTACCGCTCGGCGCCACCGTGGTCCGCCGCC AGCTCAAGCTGCGCGACATCCTGCACATGCAGCCGGGCGACGTGATCCCGGTGGAGATGCCGGAACACATGGTGATGCGCGCCAACGGCGTGCCCGCCTT CAAGGTCAAGCTGGGCGCCCACAAGGGCAACCTGGCGCTACAGATTCTCGAAGCGGTCGAGCGCTCGCGCTGACCGCTTCCCCCGGAGGAAAGACGAACC
|
|
| DNA Sequence for Gene |
>AJ67_04264
|fliN
ATGGCAGACGAAGAAAAAGTGACCACCGAGGAACAGGCACTGGCCGACGAGTGGGCGGCGGCGCTGGCCGAGGCGGGCGACGCCAGCCAGGACGACATCG ATGCGCTGATGGCCCAGGGCGGCGCGACTCCCGTGGCGGAGCCGAGTACCCCGCGGGCGCCGATGGAAGAGTTCGGCGCTTCGCCGAAGGCACCGACCAT TTCCGGCCTGGAGGGGCCCAACCTGGATGTGATCCTGGACATCCCGGTGACCATTTCCATGGAGGTCGGGCATACCGACATCAGCATCCGCAACCTGCTG CAGCTCAACCAGGGGTCGGTGATCGAACTCGATCGCCTGGCCGGCGAGCCGCTGGACGTACTGGTCAACGGCACCCTGATCGCCCACGGCGAGGTGGTGG TAGTGAACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGTCCCAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CATGCGTCGCTACCTGTTCGCCGGCTTCCTGCCGGCACTCGCCTCGCTGAGCGCGCCGCTGTGCGCCGCCGAGGGGACGACGGGTGCCGCCGCGCCGACG GTGGGCGCCGCTTCCGGCGCCGCCGCGCAACTGGCCCAACTGGTGCTCGGCCTGGGCCTGGTGATCGGCCTGATCTTCCTGCTCGCCTGGCTGGTGCGCC GGGTGCAACAGGCCGGTCCGCGCGGCAACCGCTTGATCCGCACCCTTGCCAGCCAGCCGCTGGGTCCGCGCGACCGGCTGGTGCTGGTGCAGGTCGGTGA GGAGCAGATCCTGCTCGGCCTGACGCCCGGCCGGATCACGCCGTTGCACGTGCTCAAGGAGCCGGTACACCTGCCGGACGGCGAGCCGGCCACGCCGGAA TTCGCCCAGCGCCTGCTGGAGCTGCTGAACAAGGACCCCAAGGGCAAGCCATGACTCCGCGCATCTCCCTGGCCGGCGCGCTCGCCGCGCTCTGCCTTCT
|
|
| Amino Acid Sequence |
>flagellar motor switch protein FliN
MADEEKVTTEEQALADEWAAALAEAGDASQDDIDALMAQGGATPVAEPSTPRAPMEEFGASPKAPTISGLEGPNLDVILDIPVTISMEVGHTDISIRNLL QLNQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|