Pseudomonas aeruginosa 3580, AJ67_04052
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGCGCCAGGCCGAGATAGCCCTCCAAGGACAACCGGCGCACCGGGAAACCGGCCCAGCCGAACTGGTCGCAGAGCGCCGAGACCAGCATCTGCCCGGC CACCACGCACGCGATGAAAGTGGCGGCACCCAGGCGCGGCGCGACCAGGATCGCCACCGTCAGGTAGGCCGCGCCGAACAGCCCGCCGAGCCAGCTCCAC CAGGGCGCGCCGCCGAGGCTGGCGGTAGCCGGCAGCGGCACCCGCACCAGCAGCAGGCCCAGGCTGACCACCCCGAGGCTGACGCCCAGCGAAGTCAGGC TGGCGCTCAGCGGATGGCCGAGCAGGCGCCCGAGCAAGGCGTTGCTGCCGGCCTGCAGCACCACCATGCCGCCCACCGAAACTGCCATCAGTACCATCAG ATAATTGGGCATGCTGATTCTCCTCCTCCGGCCCTTGCCTCTGGAGCAGAGTTTTTGCTATCCACTTCGCGAATGGAAATCGATAGTTGGTACACCTTCC
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| DNA Sequence for Gene |
>AJ67_04052
ATGCAGCAGATTCATGACCTACGCCGTATCGACCTCAACCTGCTGGTGGTGCTCGACGCGCTCCTCAGCGAGCGCCACGTGTCCCGCGCGGCGCAGCGCC TGGCCATGTCGCAGCCGGCGGTCAGCCACGCCCTCGGGCGTCTCCGCGAACTGTTCGGCGATCCACTGCTGGTGCGGGTGAAAAGCCGCATGCAGTTGAC CAGCCTGGCGCTGGAGCTGGCGCCGAAGCTCCAGGCCAGCCTCGACCAGGTACGCGGGGTGATCGGCGGGCCGACCTTCGAACCGGTGCGCAGCCGACGC CACTTCCGCCTGGGCATGTCCGACTACGGCGCCTGGGTGGTGCTGCCGGCGCTGCTGCGCCAGCAACAGGCGCTGGCGCCCGGGGTGAGCTTCGGGATAG TCCAGGAACCGCGCCTGGAAACCGCCCGTCAGGTCGCCGAAGGACAGCTGGACTGCGCGCTGGGGGTATTCCCCCTGCTTCCGGAGGGCGTGCGCGCCAG GCGCCTGTTCGAGGAGCGTTTCGTCTGCGTCTGTCGGCGCAGCCTGTTCGACCGCCCCGACGGCCTGTCCCTCGACCGCTACCTGGCGGCCCGCCACGTG CGCGTCTCGCTACAGGACAACCCGGCCGAGGAAGTCGACAGCGCCCTGGAAAAACGCGGCCTGCGCCGGCAGGTGGCGCTGACCCTGCCGCACTTCACCG TGGCCCCGGCGCTGCTGGCCGGCACCGACCTGGTACTGACCATCGCCGAACGCACCCTCGAAAGGTTGCGGCTACCCGAGGAACTGGCGCTCTGCGAGCC GCCGCTGGCGATCCCGCGCTTCGACTATGTGCAGATCTGGCGCGGCGACGCCGAGCGCGAAGCGGCCGGCGCCTGGCTGCGGGAACAGATCCAGGCGGCG GCGCGGAAGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGAAGAGTCAGGAAGGCTTTTCCAGCTTGCGCAGCATCTCGCCGACACGCTCGCCGAGCATTTCGTTGGCCGACAGCTTGAGGCCGCGCGCCAGTTCCAC CTGGACCACGTGTTCCGCCAGCGGGCGCAGGCGCAGGAACACCTTGGCCAGTTCCTGCAGGTCCGGCGCCCCGGGCAGCAGGTCGGTGCCGCGGCCGTCC ACCAGGTGGGTGACGATCAGGCGGACGATTCCCGCCGCCAGATGCTCGGTGTCGCTGCGCAACTCGCCGAGTTGATCGAGCAGCGCCTCCAGCGGGATGC CGCTGCGGTACAGTTCCAGCCCGGCCTGGAACAGCCGTGGACTGGGGATCTTCATGCGCTCGCCGTCGAACAGCAGCAGGCCCAGCGCCTGGGCCTTGTC GATCACCCGGTCGTTCAGTTCGTCGCCGAAGATCGCCTGGAGTTCGTCGAAGCCGATGCTGCCGGGCGTCTCCAGGTTCCACTCGCCGATGATCGCCTGG
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| Amino Acid Sequence |
>transcriptional regulator
MQQIHDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRVKSRMQLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRR HFRLGMSDYGAWVVLPALLRQQQALAPGVSFGIVQEPRLETARQVAEGQLDCALGVFPLLPEGVRARRLFEERFVCVCRRSLFDRPDGLSLDRYLAARHV RVSLQDNPAEEVDSALEKRGLRRQVALTLPHFTVAPALLAGTDLVLTIAERTLERLRLPEELALCEPPLAIPRFDYVQIWRGDAEREAAGAWLREQIQAA ARKI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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