Pseudomonas aeruginosa 3580, AJ67_03219
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGGATGGCCTCGGCGGCGAGGACGACCTGGTCGCCCAGGCCCTGGTCGAGATGGGCCTGGCTGCGCCGGAACGGGTGGCGGCGCTCTACGCGGAAGCC GGGCTGCTGCCGATGGGCACCCGCACCCGTGGCCGGGAGGCGTTGCGCGAACGCGTCGAACGACACTTCCGGGTCGACTCCATCGTCTCCCGCCCGGCGG TCCTGCGTGTCGCCGACTCCGCCGAATACCAGCGTTTCCACGCCGCCACCTTCGGCACCTATTTCGCACCGCTGGTGCCGGCGACGCGCCTGGAGGAATT CTTCGTCCGCCTCGGGCGGATCGCCGAGCGGCGTATGCAGGCCGACGGACAGGTCAGCGAAATCCCGGTCAGTGTCTGGCGCTGCCGGGCTCGGGAGGGC GAGGCATAACCTTATGCGCAATCGGTCTGCCGCGCGGCTGAAAATCGGTACGGGCAATTGCACTCGGTGGCATCCGCAACCGATCAAGGATGAACCGACC
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| DNA Sequence for Gene |
>AJ67_03219
ATGTCCAACCCGCGTTCGCCACGTCTTCGACTCGTCCCCGTGCTCTGCGCGGTCGGCCTGGCCTGCCTTGGCCAGCCCGGCGAGTCGGCGGCAGAGGAGG TCCGCGCCACCAGCAGCGCCGAGATCCAGCGCTTCGACATCCCGGCCGGCGAACTGGCCCAGGTACTGCTGAGCATAGTCCGCCAGAGTCGCACCCTGAT CGCCTTCGACCAGCACCTGGTGGAGGGCCTGCCGGCACCGGCGATCCAGGGCTCCTACAGCGTCGAGCAGGCGCTGCAGCGGGCCTTGCAGGGCAGCGGC CTGGAATACAGCCGCAGCGCCGCCGGCGTGCTCAGCCTGCAACGCGCCACGGCGCCGGATGCCGCGCTGCCGGCGGCGAAGCCCGCCGGGACCCTGGCCA CGGTGGTGGTCACCGGCACCCGCAAGGCCGATGTCAAGGCCGGCGAGAGCCTGGCACCGATCGATGTGGTCAGCGCCGAGCAATTGCGCGACAGTGGTAG CGGCGACCTGCGCGACGCCCTGGTGCGCCTGCTGCCCTCGCTGTCGCGCCAGGCCCAGGCCTACAACGCTTCGGCGCTGACCAACGCGCAGTCGCTGCGC GGCCTGAGTCCCAACCACGTGCTGGTGCTGGTGAACGGCAAGCGCCGTCACGAGACCGCCAACATCAATGTCAGCGGCGGGCTGCAGAGCGGCTCCACCG GGGTCGACCTGGATACCATCCCGCTCGCCGCCATCGAGCGCATCGAGGTGCTGCGCGACGGCGCCTCGGCGCAGTACGGCTCGGACGCCATCGCCGGGGT GATCAATGTCATCCTCAAGTCGGCCGACCACGGCGGCCGGCTCGCCTACGACAACGGTCGCTACGGCGATGGCGACGGCCTGACCCAGAACGGTGGGGTG AATGGCGGCCTGCGTTTCGGCGAGAGCGGTTTCCTCAACCTCAGCGCGCAGTTCCGCGAACAGGCGCGGACCATCCGCGCCGGCATCGACCAGCGTACCG GGCACTACGGCAACCCGTCCATCGGCGACCCTTCGCTGCACCGCCAGGCGCTGGCCTACAACGCCGGCGTGGCGCTGGACGACAACGTCGAGCTGTACAG CTTCGCCACCTATACCCATCGCTCGGTGTCCTCGGCGCAGATCTACCAGTTGCCGTCCCTGGCGCCGCGACTCTATCCGAACGGCTTCACCCCGCGCATC ACCAGCGACGAGGACGACTATTCGCTGACCCTCGGCGCCCGTGGCGGCGAGCTGTTCGGCGCCTGGGACTGGGACCTCAGTTCGACCTACGGTGCCGACC GCCCGGAGATCGGCATGGACCATTCGATCAACCTCGCCCTCTACGGCGAGACCGGCGATTCGCCGCGCTCCTTCGACCTGGCGCGCTACAAGGCCACCCA GTGGACCAACAATCTCGACCTGCGCCGCGACTTCGACCTCGCCTGGCTGCCGGCGCCGCTGAATTTCTCCTGGGGCCTGGAGCAGCGCCGCGAGCTCTAC GAGGTCGAGGCCGGCGATCCCTGGTCCTACTACAACGGCGGTTCCAAGGCACTCCCCGGGCAGGCGCCGGCCACCGCCGGACAGTGGAGCCGCGACGTGC TCGGCGCCTATCTCGACCTGTCCATCGCCCTCGACGAGCGCTGGCAACTGGAGACGGCGGCGCGCTACGAGCACTACAGCGACTTCGGCAGCACCACCAA CGGCAAGCTCGCCAGCCGCTACCGCTTCAGCCCCGAGGTATCGGCGCGGGCCAGTCTCAGCAGCGGCTTCCGCGCGCCGTCGCTGGCCCAGGAGAACTAC ACCAGCCTGGGCGTCTCGCCGACCATCGCCAGCGGCCTGCTGGCGGTCAACTCGCCGGCGGCCAGGCTGCTCGGCGCCGAAGACCTGGAGCCGGAAAAAT CGATCAGCTACAACCTCGGCCTGGTGCTCGATCCCTTGCCGGACCTGAACCTGGCCATCGACGCCTATCGCATCGAGATCCGCGACCGCATCGTCGACGG TGCCACCTATTCCGGACAGCCGGCGATCGATGCGCTGCGCGCCGGCGGGATCAGCATCCCGGCCGGACTGACCCAGGTCAGCACCCACTACATGACCAAC GGCGCCGACACCCGTACCCACGGCCTCGACCTCACCGCCAGCTACCTGACCCGGCTCGGCGAGTGGGGCCGGATCGACTGGCGTCTGGGCGCCAACGTCA ATCGCACGAAGCTGGTCAGGAATCATCACGGGCGCAACGGCCAGCCGCTGCTCAACGACCAGCAGCAGGCCTGGATCACCAGCTCCACGCCGCGCAGCCA GGTCAGCCTGCAGGCCGACTGGAGCTACCGGCGCTGGGGCCTGACCCTGCGCGAAACGCGCTACAGCAAGACGGTTTCCGAACTGGACTACTACACCGGC GAGCATGCCTATTCGACCACGGTCTTCAACCGCTTCGAGAATTCGCCCAAGTACATCACCGACGTTGCCCTGCGCTATGCGGCGAGCCGCAACCTGACCC TGAGCGCCGGGGCCAACAATCTGTTCGACGTGAAGCCCGACAAGCTGCCGGCCGAGAGCGCCTACCTCGGCTTCAACCAGTACGACACCTATGCCTCGCA GATCAGCTTCAACGGCGCCTTCTACTACCTCGGCGCGGCCTACACCTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGGACGAACCATGAGCATCGAACTGCGCGGCGGCGTGCGCGCCTCCGCGGTCATCGGCGACAGTGCCTTCGCCCGCCAGGCCGCGCGTTTCCTGCCGG ACACCCGCAGTCGCGCGGTGAGCGCCTTCGACATCCAGCAGAAGGCCCGCCTGGAAGAGGCGGACGGCCTCGACGGCGCGCTGTTCACCGTTTCCGCTGC CTGGCCCGACCCCTGGCTGGTCGCCGGCTGGGCTTTGGCCGCGGCGCCGCGCCTGCGCGCCACCGTCGCGCACCGACCGGGGAGCGCCCAGCCGACCGTT GCCGCGCGCGCCCTGGCCACTCTCGACGGCCTGTCCAACGGGCGCGCCGGCGTACACCTGGTGATCGGCTCCAGCGACGCCGACGTGCGCCGCGACGGCG ACTTCGCCGACAAGGACGAACGCTACCGGCGCGCCGTGGAGTACCTGGAGGTCTTCACCCGCGCCCTGGAAAGCCGCGAACCCTTCGACTACCACGGCGA
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| Amino Acid Sequence |
>membrane protein
MSNPRSPRLRLVPVLCAVGLACLGQPGESAAEEVRATSSAEIQRFDIPAGELAQVLLSIVRQSRTLIAFDQHLVEGLPAPAIQGSYSVEQALQRALQGSG LEYSRSAAGVLSLQRATAPDAALPAAKPAGTLATVVVTGTRKADVKAGESLAPIDVVSAEQLRDSGSGDLRDALVRLLPSLSRQAQAYNASALTNAQSLR GLSPNHVLVLVNGKRRHETANINVSGGLQSGSTGVDLDTIPLAAIERIEVLRDGASAQYGSDAIAGVINVILKSADHGGRLAYDNGRYGDGDGLTQNGGV NGGLRFGESGFLNLSAQFREQARTIRAGIDQRTGHYGNPSIGDPSLHRQALAYNAGVALDDNVELYSFATYTHRSVSSAQIYQLPSLAPRLYPNGFTPRI TSDEDDYSLTLGARGGELFGAWDWDLSSTYGADRPEIGMDHSINLALYGETGDSPRSFDLARYKATQWTNNLDLRRDFDLAWLPAPLNFSWGLEQRRELY EVEAGDPWSYYNGGSKALPGQAPATAGQWSRDVLGAYLDLSIALDERWQLETAARYEHYSDFGSTTNGKLASRYRFSPEVSARASLSSGFRAPSLAQENY TSLGVSPTIASGLLAVNSPAARLLGAEDLEPEKSISYNLGLVLDPLPDLNLAIDAYRIEIRDRIVDGATYSGQPAIDALRAGGISIPAGLTQVSTHYMTN GADTRTHGLDLTASYLTRLGEWGRIDWRLGANVNRTKLVRNHHGRNGQPLLNDQQQAWITSSTPRSQVSLQADWSYRRWGLTLRETRYSKTVSELDYYTG EHAYSTTVFNRFENSPKYITDVALRYAASRNLTLSAGANNLFDVKPDKLPAESAYLGFNQYDTYASQISFNGAFYYLGAAYTF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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