Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTACTTCGGCGTTCCCGCGCTGCTGCCGGAGGCGCTGGTGAGCTGGCTGAACACGCCGCACGAGACGCCCTTGCTCGACTGGCCGTCCTTCGAGTTCCTC GCCGGTGCCTGGGGGCTGACCCTCTATACCTCGGCTTTCGTCGCCGAGGAGTTCCGCGCCGGCATCGCCTCGGTACGCCCCGAGCAGCGCGCCGCCGGCC TCGCCCTGGGGCTGACCCAGCGCCAGGTATGGCGCGTGGTGGTGCTGCCGCAGGCCCTGCGCACGGCTCTGCCGCCGCTGCTCGGGCAGTACATGAATGC GCTGAAGAACTCCTCGCTGGCGATGGCCATCGGCCTGGCCGAGCTGTCCTACGCTTCGCGCCAGGTGGAAACCGAGACCTTCAAGACCTTCCAGGCCTTC GGTATCGCCACCCTTCTCTACATCGGCGCCATCGCCCTGATCGAAGCTTTCGGCCAGGCGTTGCAGCAGACCCGCCGCTACCGCCAGGGAGGTGCCTGAG
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DNA Sequence for Gene |
>AJ67_03096
ATGGATTTCTCGGTCATCTCGGACAACCTGTCCTACCTGCTGCTCGGCGCCTACCCGGACGGCCCGCTCGGCGGAGCGGCGCTGACCCTGCTGCTGGCGT CGCTCTCCGGACTGGCTTCGGCGGTGCTCGGCCTGGTCCTCGGCGTGGCCCTCGCGGTGCTGCCCGGCAAGCCGCGCCTGCTGCTGGTGGCGCTGCTCGG CTTCTTCCGCGCGATCCCGGTGCTGATGCTGATCTTCTGGACCTACTTCCTGCTGCCGATCGTCTTCCATGTCGACGTACCGGCGCTGGCCACCGTGGTC TGCGCGCTGTCGCTGATCGGCGGCGCCTACCTCGCCCACTCGGTGTACGCCGGCATCCACAGCCTCCCCGCCGGGCAGTGGGCGGCCGCCCGCGCGCTCG GACTGCGGCCGTGGCAGGTATTGCGCCTGGTGATCCTGCCGCAGGCGCTGCCGGTGATGCTGCCATCCTTCCTCAACCAGTGGGTGTCGCTGATCAAGGA CACTTCCCTGGCCTACGTGATCGGAGTCGGCGAGCTGTCCTTCGTCGCCACCCAGGTGAGCAACCGGGTGATGGTCCACCCGACGGAGATCTTCCTGTTC GTCGCCCTGCTCTACTTCCTGCTCTGCACCAGCCTCGACCTGGCCGCCGCGTTCCTCGCCCGCCGCCGGCGGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGCGGCCGGTGGCTCAGGCGTCGCCGCGCGCCCGCGCGTAGTCGACCAGGTCGCCGAGGTAATGCGGCGAGGCGCGCAGGACGCCATCGTCCCAGCCG TAGAGCACGCCCAGCGCCGACACCTCCATGGCCCACCAGCCCCAGGCGTAGGGGCCGGTCAGGCGGCGGGTCTTCTTCTGCGCCTTGGGGGAAAGCTGGA AGAACTCCCGGTACTGGCTTTGCAGGTAAGGCGCCAGCGCCTGGGCGTCGCTGCCGTCCGCCTCTTCGAAGAACGCCCGCAACTGCCCGAACGGCCGTGG ATGGAAGGTTTCCTCGCTGGCGGAAGTCAGGCCGAGGGCGGCCGCGCCGAGATAGTCGAGCAGGCGGTCGGTATCGAACTGCAGGACCTCCTCGACCAGC GCCGGGATGAGCTCCTGGGCATCGAGCAGCACGCCCATGGCGAGCAGTTGCAGCGCGAACGGATACTGGCCTGTGCGCGGCGCCAGGGCCGGCGCCGTCT
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Amino Acid Sequence |
>polar amino acid ABC transporter permease
MDFSVISDNLSYLLLGAYPDGPLGGAALTLLLASLSGLASAVLGLVLGVALAVLPGKPRLLLVALLGFFRAIPVLMLIFWTYFLLPIVFHVDVPALATVV CALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVMLPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLF VALLYFLLCTSLDLAAAFLARRRRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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