Pseudomonas aeruginosa 3580, AJ67_02975
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCACGCCTACAAGCGTTCGGAGAAGTTCCGCGACGCCACCGACCGCACGGTACTGAAGCTGCCTATCGTCGGCGCCATCCTCTACAAATCCGCCGTGGC ACGCTACGCGCGGACGCTGTCGACCACCTTCGCCGCCGGCGTGCCATTGGTGGAAGCCCTCGACTCGGTTTCCGGCGCCACCGGCAACGTGGTGTTCAGG GACGCGGTGGGCAAGATCAAGCAGGACGTGTCCACCGGCATGCAGCTGAACTTCTCCATGCGCACCACCAACATCTTCCCCAGCATGGCCATCCAGATGA CCGCCATCGGCGAGGAGTCGGGCGCGCTGGACGACATGCTGGCCAAGGTCGCTGGCTTCTACGAGCAGGAAGTGGATAATGCCGTGGACAACCTGACCGC CCTGATGGAACCGATGATCATGGCGGTCCTCGGGGTCCTGGTCGGTGGCCTGATCATCGCCATGTACCTGCCGATCTTCCAGCTGGGCAACGTCGTCTAA
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| DNA Sequence for Gene |
>AJ67_02975
ATGACCCTCCTCGACTACCTGGCCAGCCATCCGCTGGCCTTTGTCTTGTGCGCCATCCTCCTTGGCCTGCTGGTCGGCAGCTTCCTCAACGTCGTCGTGC ATCGCCTGCCGAAGATGATGGAGCGCAACTGGAAGGCCGAGGCCCGCGAAGCGCTCGGGCTGGAGCCGGAACCCAAGCAGGCGACCTACAACCTGGTGCT GCCGAATTCGGCGTGCCCGCGCTGCGGCCACGAGATCCGCCCCTGGGAAAACATCCCGCTGGTCAGCTACCTGGCGCTGGGCGGCAAGTGCTCGTCCTGC AAGGCCGCCATCGGCAAACGCTACCCCCTGGTGGAACTGGCCACCGCGCTGCTTTCCGGCTACGTCGCCTGGCATTTCGGCTTCACCTGGCAGGCGGGCG CGATGCTCCTGCTGACCTGGGGTCTGCTGGCGATGAGCCTGATCGATGCCGATCACCAACTGCTGCCGGACGTGCTGGTGCTGCCGCTGCTCTGGCTGGG CCTGATCGCCAACCATTTCGGCCTCTTCGCCAGCCTCGACGATGCGCTGTTCGGCGCGGTGTTCGGCTACCTGAGCCTGTGGTCGGTGTTCTGGCTGTTC AAGCTGGTGACCGGCAAGGAGGGCATGGGCTACGGCGACTTCAAGCTGCTGGCCATGCTCGGTGCCTGGGGCGGCTGGCAGATCCTGCCGCTGACCATCC TGCTGTCGTCGCTGGTCGGGGCGATCCTCGGGGTGATCATGCTGCGCCTGCGCAACGCCGAAAGCGGCACGCCGATCCCCTTCGGTCCCTATCTGGCTAT TGCCGGGTGGATTGCTTTGCTCTGGGGTGATCAAATAACCCGGACCTATCTGCAATTCGCCGGATTCAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCAACCCTGGATACTAGGCCTCACGGGCGGTATCGGCAGCGGCAAGAGCGCAGCCGCCGAGCACTTCATCTCCCTCGGCGTCCACCTGGTGGACGCCGA CCATGCCGCCCGCTGGGTGGTGGAGCCGGGGCGTCCGGCCCTGGCGAAGATCGTCGAACGCTTCGGCGACGGCATCCTCCTGCCCGATGGCCAGCTCGAC CGCGCCGCCTTGCGCGAGCGGATCTTCCAGGCGCCGGAGGAACGGCGCTGGCTGGAGCAATTGCTGCACCCGCTGATCGGCGCGGAGATCGTCCAGTACC TGGCCAGGGCCGAATCGCCCTATGCCATCCTGGTCTCGCCGCTGCTGGTGGAGTCCGGCCAGCGCCAGATGACCCACCGCGTGCTGGTGGTGGATACCCC GGAACATCTGCAACTACAGCGCACCATGCTTCGCGACAAGGTCTCCGAGGAGCAGGTGCGCTCGATCCTCCAGGCCCAGGCCCGGCGCGACGAGCGCTTG
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| Amino Acid Sequence |
>type 4 prepilin-like protein leader peptide-processing enzyme
MTLLDYLASHPLAFVLCAILLGLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRPWENIPLVSYLALGGKCSSC KAAIGKRYPLVELATALLSGYVAWHFGFTWQAGAMLLLTWGLLAMSLIDADHQLLPDVLVLPLLWLGLIANHFGLFASLDDALFGAVFGYLSLWSVFWLF KLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESGTPIPFGPYLAIAGWIALLWGDQITRTYLQFAGFK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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