Pseudomonas aeruginosa 3580, AJ67_02564 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGTATTCGAGGAAACCCTCGCCGAATTGGTTTCACTGGATGACCTGACCCTTAGCTACTACCGAGGCTGGGACAAGGACCGGGACCTCCTGGAGGTCC TGGCTTCCAGCCTGTTACGCGACCAGCAGATGGGCCACACCCAGGCGGGACCGCAGCGTGCGGATCTTCGCATACGGTTGTCAGGTCATAACGCCGCGGA GATTCTCTCGCGCGGTCAGCAGAAGCTGGTGGTATGCGCCCTGCGCATCGCCCAAGGCCATCTGATCAATCGCGCCAAGCGCGGACAGTGCGTCTACCTG GTGGACGACCTGCCCTCGGAACTGGATGAGCAGCATCGAATGGCTCTTTGCCGCTTGCTTGAAGATTTGGGTTGCCAGGTATTCATCACCTGCGTGGACC CGCAACTATTGAAAGACGGCTGGCGCACGGATACGCCGGTATCCATGTTCCACGTGGAACATGGAAAAGTCTCTCAGACCACGACCATCGGGAGTGAAGC
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| DNA Sequence for Gene |
>AJ67_02564
|gyrB
ATGAGCGAGAACAACACGTACGACTCTTCCAGCATCAAGGTGCTGAAGGGGCTGGATGCCGTACGCAAGCGCCCCGGCATGTACATCGGCGACACCGACG ATGGCACCGGTCTGCACCACATGGTGTTCGAGGTGGTGGATAACTCCATCGACGAAGCGCTGGCCGGTTACTGCAGCGAAATCAGCATCACCATCCATAC GGATGAGTCGATCACTGTCCGCGACAATGGACGCGGTATTCCGGTGGATATCCACAAGGAAGAAGGGGTTTCTGCGGCGGAAGTAATCATGACCGTCCTC CACGCCGGCGGCAAGTTCGACGACAACACCTACAAGGTGTCCGGCGGCTTGCACGGTGTGGGCGTCTCGGTGGTGAACGCGCTGTCCCATGAACTACGCC TGACCATCCGTCGCCACAACAAGGTCTGGGAACAGGTCTACCACCACGGCGTTCCGCAGTTCCCACTGCGCGAAGTGGGCGAGACCGATGGCTCCGGCAC CGAAGTTCACTTCAAGCCGTCCCCGGAGACCTTCAGCAACATCCACTTCAGTTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCCTTCCTCAACTCC GGCGTCGGCATCCTGCTGCGCGACGAGCGTACCGGCAAGGAGGAGCTGTTCAAGTACGAAGGCGGTCTGAAGGCCTTCGTCGAGTACCTGAACACCAACA AGACCGCGGTGAACGAGGTATTCCACTTCAACGTCCAGCGTGAAGAGGACGGCGTGGGTGTGGAAGTCGCCTTGCAGTGGAACGACAGCTTCAACGAGAA CCTGCTCTGCTTCACCAACAACATCCCGCAGCGTGACGGCGGTACCCACCTGGCCGGTTTCCGTTCGGCGCTGACGCGTAACCTGAACAACTACATCGAG GCCGAAGGCCTGGCGAAGAAGTTCAAGATCGCCACCACCGGCGACGATGCCCGCGAAGGCCTCACCGCGATCATCTCGGTGAAGGTACCGGACCCGAAGT TCAGCTCGCAGACCAAGGACAAGCTGGTCTCCTCCGAGGTGAAGACTGCGGTGGAACAGGAGATGGGCAAGTACTTCGCCGACTTCCTGCTGGAGAATCC CAACGAAGCCAAGGCCGTGGTCGGCAAGATGATCGACGCCGCCCGTGCCCGCGAGGCCGCGCGCAAGGCGCGCGAGATGACCCGCCGCAAGGGCGCGCTG GACATCGCCGGCCTGCCCGGCAAACTGGCCGATTGCCAGGAAAAGGACCCGGCGCTCTCCGAACTGTACATCGTGGAGGGTGACTCCGCGGGCGGTTCCG CCAAGCAGGGCCGCAATCGCCGGACCCAGGCGATCCTGCCGCTCAAGGGCAAGATCCTCAACGTCGAAAAGGCGCGCTTCGACAAGATGCTCTCCTCCCA GGAGGTCGGTACGCTGATCACTGCCCTGGGCTGTGGCATCGGTCGCGAGGAATACAACATCGACAAGCTGCGCTACCACAACATCATCATCATGACCGAT GCTGACGTCGACGGTTCGCACATCCGCACCCTGCTGTTGACCTTCTTCTTCCGCCAGATGCCCGAGCTGATCGAGCGTGGCTACATCTACATCGCCCAGC CCCCGTTGTACAAGGTCAAGCGCGGCAAGCAGGAGCAGTACATCAAGGACGACCAGGCCATGGAAGAGTACATGACCCAGTCGGCCCTGGAAGACGCCAG CCTGCACGTCAACGAGCACGCTCCGGGCCTGTCCGGAGCAGCGCTGGAGAAACTGGTCAACGAGTATCGCGGGGTGATCGCCACCCTCAAGCGCCTGTCG CGCCTGTACCCCCAGGAGCTAACCGAGCACTTCATCTACCTGCCTACCGTGTCGGTGGACGACCTGGCTAACGAGTCGGCCATGCAGGGCTGGTTGGAGA AGTTCCAGGCGCGTCTGACCGCCGCCGAGAAGTCCGGCCTGACCTACAAGGCCAGCCTGCGCGAAGACCGCGAGCGCCACCTGTGGCTGCCCGAGGTGGA ACTGGTGGCCCACGGCCTGTCCAGCTACGTCACCTTCAACCGTGACTTCTTCGCCAGCAATGACTACCGCTCGGTGTCGCTGCTCGGCGACCAGCTGAAC AGCCTGCTGGAAGACGGCGCCTACGTGCAGAAGGGTGAGCGCAAGCGCCCGATCAGCGCCTTCAAGGACGGCCTGGACTGGCTGATGGCCGAAGGTACCA AGCGCCACAGCATCCAGCGATACAAGGGGCTGGGCGAGATGAACCCTGAGCAGCTGTGGGAAACCACCATGGATCCGAACGTCCGGCGCATGCTCAAGGT GACCATCGAGGACGCCATCGCCGCCGACCAGATCTTCAACACCCTGATGGGCGATGCCGTGGAGCCGCGCCGCGACTTCATCGAAAGCAACGCGCTGGCG GTGTCGAACCTGGACGTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGGTCGGCAGACCGACCCTCATGGAAACCCCGGCCTGGCGCCGGGGTTTTCTTTTTGCGCCAGGTAGCCTGGATATGTGCCTTGCCAAGGTGTGGCCGA GCCCCGGTTGCTCGCCAGCATTGGCACCCTGGACCCAGGCCTCCTGGCGGCGTGGCACCGCTTCTGTGGGCAGCGGTCGCCGGTCGGTTCGGTCGATCGT TTCCAGCCGGCCTTGCTTTGCGCCTCGCGTGAAAACAAGAAGCCCCGCTATGGCGGGGCTTCTTTTATCGAATCGGCGCACAGTGCGCCTTGCAGGGGGC TTTGCGGCCCTTCACGAGACCACCGACGGCTCCGGATGGCTGACCCGCTGCTGGATGGGGCTGATCTCGGCCATGGTCTCGCTGACCCAGGCTTCGGCGC GCTGGTTTAGCTCGGCGATGGCGCGCGGGCCTTCGCCTTCGGCGTGCATGGCCGGGCCGATCACCACCTGGATGGTGCCCGGGTACTTGGCCCAGCCGGC
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVL HAGGKFDDNTYKVSGGLHGVGVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIHFSWDILAKRIRELSFLNS GVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEVFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE AEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGAL DIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTD ADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLS RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLN SLLEDGAYVQKGERKRPISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNALA VSNLDV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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