Pseudomonas aeruginosa 3580, AJ67_01088

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03810
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006865 amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00905
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006527 arginine catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03810
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:1903826 arginine transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03810
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043858 arginine:ornithine antiporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03810
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR42770 AMINO ACID TRANSPORTER-RELATED - - 1 442 6.0E-93
Pfam PF13520 Amino acid permease IPR002293 Amino acid/polyamine transporter I 13 455 7.4E-73
PIRSF PIRSF006060 AA_transporter - - 1 480 2.2E-51
Gene3D G3DSA:1.20.1740.10 Amino acid/polyamine transporter I - - 4 474 1.1E-63
NCBIfam TIGR03810 JCVI: arginine-ornithine antiporter IPR022461 Arginine/ornithine antiporter 7 481 0.0
FunFam G3DSA:1.20.1740.10:FF:000098 Arginine/ornithine antiporter - - 4 474 0.0
NCBIfam TIGR00905 JCVI: basic amino acid/polyamine antiporter IPR004754 Amino acid antiporter 1 482 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.