Pseudomonas aeruginosa 3580, AJ67_00616
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGGCAGCCCCGAAGGCGAGCTGGCGGTGGCCCAGGCCATCGTCTACCTGGCCTGTGCGCCGAAGAGCAATGCGGTGTACAGCGCGTTCAACGCGGCG ATGCGCGACGTCGCCGAAAGCGGCTCGCGGGAAGTGCCATTGCACTTGCGCAACGCGCCGACCAAATTGATGAAGAGCCTTGGCTATGGCGAGGAATACC GCTACGCCCACGACGAGCCGGATGCCTATGCCGCCGGAGAGGATTATTTCCCCGAGGATCTGGAGCCGCGGCGTTACTATCAACCGGTGCCGAGGGGCCT GGAACTGAAGATCCGCGACAAGCTGGAACACCTGGCCGAGCTGGATCGCACCAGTCTCCGCCAACGCAGAAAATCCTGAGCGGTATGGGCTCGGCGGAGC TAGCCAGGCTTCCGCGACGGCGTCGATGACGTCGCCGGGGCCGGCGAAGCGCCAACCGGGCCACGAACCGCCGATAACCGACACGAGACGAGAAAAGAGC
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| DNA Sequence for Gene |
>AJ67_00616
ATGCTCGATCCCAAACTGGTACGCACCCAGCCGCAAGAAGTGGCTGCCCGCCTGGCCACCCGTGGCTTCCAACTGGATGTCGCACGCATCGAAGCGCTGG AAGAGCAGCGCAAGTCGGTACAGACCCGTACCGAGCAGCTGCAAGCCGAGCGCAACGCGCGTTCCAAGGCGATCGGCCAGGCCAAGCAGCGTGGCGAGGA CATCGCGCCGCTGCTGGCCGATGTCGATCGCATGGGCTCCGAGCTGGAGGAAGGCAAGCGCCAGCTGGACGCCATCCAGGGCGAACTGGATGCCATGCTG CTGGGCATTCCCAACCTGCCGCACGAGTCGGTGCCGGTCGGTGCCGACGAGGACGCCAACGTCGAAGTGCGTCGCTGGGGCACGCCGAAGACCTTCGATT TCGAGGTCAAGGACCATGTCGCCCTCGGTGAACGGCACGGCTGGCTGGATTTCGAGACCGCCGCCAAGCTTTCCGGCGCGCGCTTCGCCCTCATGCGCGG CCCGATCGCCCGCCTGCATCGCGCCCTGGCGCAGTTCATGATCAACCTGCATACCGCCGAGCATGGCTACGAGGAGGCCTACACCCCCTATCTCGTCCAG GCTCCGGCGCTGCAAGGCACCGGCCAGTTGCCGAAGTTCGAGGAGGACCTGTTCAAGATCGGCCGCGACGGCGAAGCTGACCTCTACCTGATCCCGACCG CCGAGGTTTCGCTGACCAACATCGTCTCCGGGCAGATCCTCGACGCCAAGCAATTGCCGCTGAAGTTCGTCGCCCATACCCCGTGCTTCCGCAGCGAGGC CGGTGCCTCCGGGCGCGATACCCGCGGCATGATCCGTCAGCATCAGTTCGACAAGGTGGAGATGGTGCAGATCGTCGATCCGGCCACTTCCTACGAGGCG CTGGAAGGCCTGACCGCCAACGCCGAGCGCGTCCTGCAACTGCTCGAGTTGCCGTATCGGGTGCTGGCGCTGTGCACCGGCGACATGGGCTTCGGTGCGA CCAAGACCTACGACCTGGAAGTCTGGGTTCCCAGCCAGGACAAGTACCGCGAGATTTCCTCCTGCTCCAACTGCGGCGACTTCCAGGCCCGGCGCATGCA GGCCCGCTACCGCAATCCGGAAACCGGCAAGCCCGAGCTGGTGCACACCCTCAACGGCTCCGGCCTGGCCGTCGGCCGCACCTTGGTGGCGGTACTGGAG AACTACCAGCAGGCGGACGGCTCGATCCGTGTGCCGGAAGTCCTCAAGCCCTACATGGCTGGCATCGAGGTGATCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CATGGATTTCCTGCCGCTGTTCCACTCCTTGCAAGGGCGCCTCGCGCTGGTGGTCGGTGGCGGCGAAGTCGCCCTGCGCAAGGCGCGCCTGCTGGCCGAC GCCGGCGCGCGCCTGCGCGTGGTCGCGCCGCAGATCCACATCGAACTGCGGCATCTGGTGGAGCAGGGCGGCGGCGAGCTGCTCGAACGCGACTACCAGG ACGGCGACCAGCCCGGCTGCGCCCTGATCATCGCCGCCACCGACGACGAACCGCTGAACGCCGAGGTGTCGCGAGCGGCCAATGCGCGCGGGATACCGGT CAATGTGGTGGACGCGCCGGCCCTGTGCAGCGTGATCTTCCCGGCCATCGTCGACCGTTCGCCGCTGGTGGTGGCGGTCTCCAGCGGCGGCGATGCGCCC GTGCTGGCGCGGCTGATCCGGGCCAAGCTGGAAACCTGGATTCCCTCGACCTACGGGCAACTGGCCGGACTCGCCAGCCGCTTCCGCCACCGGGTCAAGG
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| Amino Acid Sequence |
>seryl-tRNA synthetase
MLDPKLVRTQPQEVAARLATRGFQLDVARIEALEEQRKSVQTRTEQLQAERNARSKAIGQAKQRGEDIAPLLADVDRMGSELEEGKRQLDAIQGELDAML LGIPNLPHESVPVGADEDANVEVRRWGTPKTFDFEVKDHVALGERHGWLDFETAAKLSGARFALMRGPIARLHRALAQFMINLHTAEHGYEEAYTPYLVQ APALQGTGQLPKFEEDLFKIGRDGEADLYLIPTAEVSLTNIVSGQILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVDPATSYEA LEGLTANAERVLQLLELPYRVLALCTGDMGFGATKTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPEVLKPYMAGIEVIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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