Pseudomonas aeruginosa 3580, AJ67_00344

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01047
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01047
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01047 MarR family IPR000835 MarR-type HTH domain 42 100 9.2E-16
FunFam G3DSA:1.10.10.10:FF:000163 MarR family transcriptional regulator - - 8 149 1.3E-55
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 7 149 5.3E-37
PRINTS PR00598 Bacterial regulatory protein MarR family signature IPR000835 MarR-type HTH domain 76 91 3.0E-6
SMART SM00347 marrlong4 IPR000835 MarR-type HTH domain 35 133 1.2E-22
PANTHER PTHR33164 TRANSCRIPTIONAL REGULATOR, MARR FAMILY IPR039422 Transcription regulators MarR/SlyA-like 13 119 1.3E-21
PRINTS PR00598 Bacterial regulatory protein MarR family signature IPR000835 MarR-type HTH domain 95 111 3.0E-6
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 8 148 2.61E-35
PRINTS PR00598 Bacterial regulatory protein MarR family signature IPR000835 MarR-type HTH domain 59 75 3.0E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.