Pseudomonas aeruginosa 3581, AJ68_04544

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa 3581 adTwT-supercont1.16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCACCAGGCGGTGGACCACCTGCTGCTCACCGGGTGCGGCAGGCGTACCGACGTGCGCTGGCAGGGCGGGCTGGCCGCGCACGTGCGGCGGCGCCTGGCC GACTACATCGAAAGCCACTTGGAGCAGCCGCTGGAACTGGGGTCGCTGGCGGAGCTGGCGGCGCTCTCCGAGTACCACTTCGCGCGCATGTTCCGCGTAT CCTTCGGCCTGCCGCCGCACCGCTACGTGCTGGAACGACGCCTGGCGCGGGCCCGCGACCTGCTGGCGTACTCCGCGCAGCCGCTCCAGGAGGTCTCGCT GGCCTGCGGCTTCGCCAGTCCGAGCCATTTCAACCGGCGCTTCCGCGAAGCCCATGGCGCCACCCCGGGGCAGTACCGCGCCGCCCTGAAAGGCTCCTGA AAGCCAGGCGCCGACAGCCTGCGGTTGTAGGCAGGCATTCCCGCAGCATAAAATGATAACTATTATCATTCGTTAATCCTTCTGCTCCGGGAATGTCCAG
DNA Sequence for Gene
>AJ68_04544
GTGTCGAGCGCCGACCTCGCCCATGCGGCCGCGTTGCATACCCTCTACAGCGACCACCACCACTGGCTCACGGGCTGGCTGCGGCGCCGCCTCGGCTGCC CGCAGAACGCCGCCGACCTGGCCCAGGACACCTTCGTCAAGGTCCTGGTTTCGCGCCAGGCCGCGCGCATCGACGAACCGCGCGCCTTCCTCACCACCAT CGCCCGCCGCGTGCTGTGCAACCACTACCGCCGCCAGGACGTCGAGCGCGCCTACCTGGAAGCCCTGGCCAGCCTGCCCGAGCGGGAAGTCCCCAGCGAA GAGACCCGCGCCATCGTCCTGGAGACCCTGGTCGAGCTGGACCGTCTGCTCGACGGTCTGCCGCCACTGGCCAAGGAGACCTTCCTGCTGGCCCAACTCG ACGGCCTGGGCTACGCCGAGATCGCCACGCAGCTGGGCATCTCCCTGAGCAGCGTCAAGCGCTACATGCTCAAGGCTGCGCAACGCTGCTACTTCGCCGA GCTGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGCCCGCCGCACCCAAGGTGCCGCCGCAGGTGGCTGAACAGGCCGTGCGCTGGCTGGTCGAGCTGCAGGGCGGCGCCGACGACGAACGCCTGCGCCA GGCCTGGCAGCGCTGGCGCCAGGCGGCCCCGGAACACGAGCAGGCCTGGCGCCACATCGAGGCGGTCAACCAGCGCCTGGCCGGGATAGGCACGCCACTG GCCCTGGCCGCCATCAACGCACCGCATTCGCCGCAACGCCGGCGCGCGCTGAAGACCCTGCTGCTGGTCCTGGCCGCCGGCGGCAGCGCCTGGGGCCTGC GCGAGAGCGGCAGCCTGCAGCGCTGGAGCGCCGACTATGCCACCGGCGTCGGCGAACGCCGGCGCCTGGCCCTGGCCGACGGCAGTCGCCTCGAGCTGAA CAGCGACACGGCGGTGGATGTCCGCTTCGATGCCGGCGAACGGCGCCTGCTCCTGCTGCGCGGGGAAATCCAGCTCAGCACCAGCCACGACCCGCGCCCG
Amino Acid Sequence
>RNA polymerase sigma factor
MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDTFVKVLVSRQAARIDEPRAFLTTIARRVLCNHYRRQDVERAYLEALASLPEREVPSE ETRAIVLETLVELDRLLDGLPPLAKETFLLAQLDGLGYAEIATQLGISLSSVKRYMLKAAQRCYFAELP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site