Pseudomonas aeruginosa 3581, AJ68_02364
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3581 adTwT-supercont1.6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCAGATGATCACTTGGCCCAGCCGCGAATCGGCGTACTCCTCCAGCCAGCGGGCCTGGGCGCGCTGGCCGATGTCGACGGGATACAGGCTCGGCTGCG GGTAGCGCTCCTCCAGGTACTGGCAGATCACGCTGGAATCGTTGAGGACGAAGTCACCGTCCACCAGCACCGGAATCTGGCGCAACGGACTGAGGCGCTC GAAGGCCTCGTCGCCGAAGAACGGCACGATGGGGTCGATGCGGTAGGCAATGCCTTTCAGTTCCAGCAGCACCAGCACCTTGCGCACATAGGGGGACAGA TAGGAACCGATGATCAGCAAAGGTTCGGCCACGGCGAGACTCCTGTTCTTGTTATGGGAACACCGATCCTCCGGCAAACCAGCGGGACGACTCAAGTGGC TTCCCGACGGACGCCAATTGCAGGGATAGTCGCACTTTGCGATCATTTGCGAATAATTCTCGTTTTTCCATTCAATCCCGTTTCGGGATGGGGAGCGGTC
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| DNA Sequence for Gene |
>AJ68_02364
GTGTCGGCGGGTGACGTCAGCAACAGCGAATTCGTGGGTAGCCTGTACCGGGACCACCGCGGCTGGCTGCTTGCCTGGCTGAACCGCAACCTCGGCTGCC GCCAGCGCGCCGAAGACCTCAGCCAGGACACCTTCGTTCGCCTCCTCGGCCGCCCGGAGCTGCCCGGCCTGCGCGAACCGCGCGCGTTCCTGGCGAAGGT GGCGCGCGGTCTGATGATCGACCACTTCCGCCGCGCCGCCCTTGAGCAGGCCTATCTCGCCGAACTGGCGCTGGTTCCGGAAGCGGAGCAGCCTTCGGCC GAAGAGCAGTACCTGATTCTCGAGGACCTCCGCGAGATCGATCGCCTGCTTGGCACGCTGTCGCTGAAGGCGCGTAGCGCGTTTCTCTATAGCCGCCTGG ACGGCATGCCCCACGCGGAGATCGCCGAGCGTCTCGGAGTCTCGGTGCCGCGCGTGCGCCAATACCTGGCCCAGGGTCTGCGCCAGTGCTACATCGCCCT CTACGGAGAGCCCCGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCCGATGATCGTCATTCGCCGGTACGCGCGCGGGTGCTCGACGAAGCCATCGCCTGGCAATTGCTGCTCGACTCCGGCGAAGCCCATCCCGACGATCA CCGCGCCTTCCACCGCTGGTACGCGGCGCATCCCGAACACGAACGCGCCTGGGAACAGCTCGGCGGCCTCGACCGGCACCTGGCGAGAGCCGCCAACGGG CCGGCACGCAACGCCCTGCTGTCCGGCAACGCACGCTTCAAGCGCCGCCTGCGCCGGCTCGGCGGCAGCGCCCTGGGGCTAGTGCTGGCGCTAGGCGTCG GGCTCGGCGTGGCCAACCGCTACGTCCCGGTCCGCTACCTGCTGGCCGATGCCTACAGCGCCACCGGCGAGCAGCGCGAGCTGACCCTCCCGGATGCCAC TCATGTGCGCCTGAACAGCCGCAGCGCCATCGACGTCCGCTTCGACGGCGAACGCCGCCAGGTCGTGCTACTGGCCGGCGAGATCCTGGTGGAAACCGCC
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| Amino Acid Sequence |
>RNA polymerase sigma factor
MSAGDVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREPRAFLAKVARGLMIDHFRRAALEQAYLAELALVPEAEQPSA EEQYLILEDLREIDRLLGTLSLKARSAFLYSRLDGMPHAEIAERLGVSVPRVRQYLAQGLRQCYIALYGEPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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