Pseudomonas aeruginosa BWH029, AJ69_04383
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH029 adTxJ-supercont1.14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGACAGGGGAAGCAGGAGCAGCAGTACGAGCAGCAGGCGGCGCATGAGAACGATCCGGAGCCGGGTGAAAAGGCGGCTATTATAGGCGCGACCGTTTCC CCTGAGCCGCCGACATGCCCACCGCCAAGCCCGAAATCGTCATCACCTATTGCACCCAGTGCCAGTGGCTGCTGCGTGCCGCCTGGCTGGCCCAGGAACT GCTCAGCACCTTCGCCGACGATCTCGGAAAAGTCTGCCTGGAGCCCGGAACCGGCGGCGTATTCCGCATCACCTGCGACGGCGTGCAGGTCTGGGAGCGC AAGGCCGACGGCGGCTTCCCCGAGGCCAAGGCGCTCAAGCAGCGGGTTCGTGACCGCATCGACCCGCAACGCGACCTCGGTCACAACGATCGTCCTTCCC GCTGAACCGCTGCCGTCCGCCCATGGCTTGTTGCAGGTCAACGGGCGGCGCGGCGCATAGGCATAGCCTGGGGGCATTCATCCTGTCGAAGGGAGTGCCC
|
|
| DNA Sequence for Gene |
>AJ69_04383
ATGAGCATCATCGTCACCGGCGCCGCCGGCTTCATCGGCAGCAATCTGCTGCAGGCGCTGAACCGGCGCGGCGAGACCGACATCATCGCGGTGGACGATC TCACCGACGGCGAGCAGTTCCGCAACCTGGCGGACGCCGATATCGCCGACTACCTGGACCAGAACGACTTCCTCGAGCGTTACGCCCGCGGCGACTTCGG CACGGTCCGCGCGCTGTTCCACCAGGGTGCCTGCGCCAGCACCCTGGAAAGCAATGGCCGCTACATGATGGAGAATAACTACCGCTACAGTTGCCGCCTG CTGGAAAGCAGCCTGGAACTCGGCGTGCCGTTCCTCTACGCCTCGTCGGCGGCGGTCTACGGCGCCGGCCGGACCTTCCGCGAGGCGCGCCAGTACGAGC GGCCGCTGAACGTCTACGGCTATTCCAAGTTCCTCTTCGACCAGCGTGTGCGGCGGGCGCTGCCGCAGGCGCGCAGCCAGGTGGTCGGCCTGCGTTACTT CAACGTCTACGGGCCGCGCGAGGAACACAAGGGGCGGATGGCCTCGGTGGCCTACCACTGCTACCAGCAATTGCGCCGCGACGGGCGGGTCGAACTGTTC GGTGAACACGGCGGCTTCCCGCCCGGTGGCCACCTGCGCGACTTCGTCGCGGTGGAGGACGTGGCGCGGGTCAACCTGCATTTCTTCGATCATCCGCAGC GTTCGGGAATCTTCAACCTCGGCAGCGGCCAGGCGCGGACCTTTAACGAGGTCGCCCTGGCGGTGATCAATAGCGTCCGCGCCAACGCCGACCAGCCGCC CCTGTCGCTGCAACAGGCCGTGGAAAGCGGCCTGCTCGGCTACCGCGAGTTCCCCGAGTCGCTGCGGGCGCGCTACCAGAGCCATACCTGCGCCGACCTG GAGCTGCTGCGCGAGGCGGGCTACCGCGACGATTTCCAGAGCCTGGAAGAGGGCGTCTCCGGCTACTGCCGCTGGCTGGCGCGCAGTGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGGATCCTGCTCAGCGGCCCAGCGCCCCGCCTACCGGGGTGCGGGCGAAGCGCAGCTCCGGCAGCAGGGTCAGCAGCGCCAGTACTCCGAGGGCCGCGCC GACCCAGAGCGCGCCCTGCAGGCCGAATCCGCCGGCGATGCCCAGGCCGCCGATCCAGGAACCGGCCATCACGCCGAGCATGATGCAGGCAGTGTGCACC GAGTTGACCAGCATGTTGTTATGGCCGACCCGTGCGCCGCGGGTCACCAGCGCCGGGTTCATCGACACCCCGGTCAGGCCGATCACCACCAGCGCCGCCA CCGCCACCGCCGGAACCTGTCCGAACAGGGCGAAGGCCACCATCGCGGCGATGGCCGCCAGCAGGCCGAAGGCCAGGACCGCGATGGTATGGCGGTCGGC CAGGCGGCCGACGATGTTGTTGCCCACCAGCGTCGCCAGGCCGTAGACCACCAGCAGCAGCGGTACGGTCGAGGCGGAGAAGCCGCTGACCTCGGTGAGG
|
|
| Amino Acid Sequence |
>ADP-L-glycero-D-manno-heptose-6-epimerase
MSIIVTGAAGFIGSNLLQALNRRGETDIIAVDDLTDGEQFRNLADADIADYLDQNDFLERYARGDFGTVRALFHQGACASTLESNGRYMMENNYRYSCRL LESSLELGVPFLYASSAAVYGAGRTFREARQYERPLNVYGYSKFLFDQRVRRALPQARSQVVGLRYFNVYGPREEHKGRMASVAYHCYQQLRRDGRVELF GEHGGFPPGGHLRDFVAVEDVARVNLHFFDHPQRSGIFNLGSGQARTFNEVALAVINSVRANADQPPLSLQQAVESGLLGYREFPESLRARYQSHTCADL ELLREAGYRDDFQSLEEGVSGYCRWLARSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|