Pseudomonas putida HB3267, B479_26350
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida HB3267, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACGCCTTTGCCCGCTTCGACGCCGACCTGGCACTGTCGGTGGCCCAGTACGACAAGACCATCGACCGCGAATACAAGACCGCCCTGCGTGAGCTGGTGA CCTACATGATGGAAGACCCGCGCTCGATCTCGCGGGTACTGAGCGTGATCTGGGTCCTGCGTTCGCTGGAGCGTATCGGCGACCATGCGCGCAATATCTC CGAGCTGGTGATCTATCTGGTGCGCGGCACCGACGTGCGTCACATGGGCCTCAAGCGCATGACGGCAGAAGTGCAAGGCACTGCTGTTTCCGACGGCGAA AACGCTAATGTTCCGGCTGAACCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTTTTCGTTTGCGGTCGAGGAGCCGG CAGGCACCCGCGAACGATGTGAAGAAGTCCCGGCGTGACCAGGTTGTAGCAAGTGGCCATTATTCGGCGGTAGGCTAGTCGGGATTCAGAAGGAGTATCG
|
|
| DNA Sequence for Gene |
>B479_26350
ATGAGTAAAGTGAATGTGCTGGTCGTGGATGACGCCCCGTTTATCCGTGATCTGGTCCGCAAATGCCTGCGCAATGCCTTCCCGGGCATGACCATCGACG ATGCCGTCAACGGTCGCAAGGCAATGGCCATGCTGGGCAAGGAAGCGTTCGACCTGGTTCTGTGCGACTGGGAAATGCCGGAAATGTCCGGCCTGGAACT GCTCACCTGGTGCCGCCAGCAGCCTGAGTTGAAGAACCTGCAATTCATCATGGTGACCAGCCGTGGCGACAAGGAAAACGTCATCCAGGCGATTCAGGCG GGCGTTTCCGATTTTGTCGGCAAGCCATTCACCAACGAGCAATTGCTGACCAAGGTGAAAAAGGCCCTGACCAAGATCGGCAAGCTCGACAGCCTGATGT CCAGCGGCCCGGCACGGGTCAACTCGGCGTTCGCCAATGACTCGCTGAATGCGCTGACAGCCGGCAAGCCTGAAGCGGTGAAGGTCGCGGCGCCAGCTCC GGCACCTGCAACCGCACCCGCCAGGCCATTGGCCAATACCCCCCGGCCCGCCACTCCCGCGCCGACCGGCCGTGGCCAGGGCCAGTTGCGCCTGGCCGGC GGCATGCAGCCGTGCGTGATCAAGGCGCTGAGCCTGAAAGAGGCTCTGCTGGTGGTGCGCCGTGGCGAAGCGCTGCCCCAAGTACTGGAAGGCGCAGTGT TGGACCTGGAACAGGGCGAGAACGCCGAAGTTGCGCGCCTGAATGGCTACCTGCATGCCGTCGCGGCACTTGAGCCCAAGCCCGACAGCGATTGGTTGCA ACTGACCTTCAAGTTCGTCGATCAGGATGCCCAGAAGCTCGACTACCTGTCGCGGCTGATTGCCCGCGGGACGGCGCAGAAGCACTTTACCCCTGGTGCC TGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCCAGTCTCACACCGCATTTTTTGTGGGAGCAGCCTTGTGCTGCGAATGGGCTGCGGAGCAGCCCCCAGGCATGAATGCCGCCGCAAGCATTGCCGGGG CTGCTTTGCAGCCCATTCGCAGCACAAGGCTGCTCCTACAAAAAACTGCGCACCCCAGGGCCATCCGACCAACTGTCATACCCGCCGCAAAACCCCCTGC TAGGCTTCGACAAATCATAACTGTCAAAAAGCCACTATCATGCCCGCCCGCCTGCTGCTGTTCTGTGCATTGCTCATGGCCTCGGCGTCGAGCCTGGGCA TGACTATTTACGAGATCACCGATGATGGCCGTGTGACCTCCTATTCCGACCGGCCCGGCCCCGGTGCCAAAACCTTTGTGCGGCGCGTGCCTATGGTCGA GGTGCCCGAAGGCCAGGTTCTGCTGAACGCGATAACCTTCAACGGCGGCGTGAGCTTTTCGGCCCGCAACCAGCTACACGTGCCAGTGGAGGTGGAGTTG
|
|
| Amino Acid Sequence |
>response regulator receiver protein
MSKVNVLVVDDAPFIRDLVRKCLRNAFPGMTIDDAVNGRKAMAMLGKEAFDLVLCDWEMPEMSGLELLTWCRQQPELKNLQFIMVTSRGDKENVIQAIQA GVSDFVGKPFTNEQLLTKVKKALTKIGKLDSLMSSGPARVNSAFANDSLNALTAGKPEAVKVAAPAPAPATAPARPLANTPRPATPAPTGRGQGQLRLAG GMQPCVIKALSLKEALLVVRRGEALPQVLEGAVLDLEQGENAEVARLNGYLHAVAALEPKPDSDWLQLTFKFVDQDAQKLDYLSRLIARGTAQKHFTPGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|