Pseudomonas aeruginosa BWH029, AJ69_00314
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH029 adTxJ-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCAGGCCGTTGTACAGGTCCAGCTCGACGCGCAGCAGCGGATGGCGTTCCTGGAAGTCCTCCAGCAGTGCATCGAACAGGGTCTCGCCCAGCGAGACCG GGAGGGTCACCCGCACCCGTCCTTCCGCTCGCTCCTGCAAGCGCGCCACCGCCTGCCGCGCGCGCTCGGCCTGCACCAGCAAGGCCTGCGCCTCGGGCAG CAGCGCGGCGCCGGCGGCGGTCAGCGAAAGACGGCGGGTGGTGCGGTGCAAGAGGGTCACGCCGAGCTTCTGCTCGAGGACGCCAATGCGCTTCGACAGT TGGCCCTTGCTGCAACCGAGACGCTCGGCGGCGCGGGTGAAACTGCCCAGGTCGTGGAGTACGGCGAAGGCGGCGAGATCGTCCAGGTCCTTCACGATTG TTTCCCTATGAAAACGGTAGGTTGTCGATTGACAGGATTATCCATGGCAAAAGCGACTCTACACTGGAAACCACTCACCTTCACTCAACGAGAGGCCTGT
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| DNA Sequence for Gene |
>AJ69_00314
ATGAAAATCATCCTGATCGGCGCCAGCGGCACCCTTGGCAAGGGTATCGACAAAGAACTCGGCGAGCGCCACGAGATCGTCCGGGTAGGCCACAGCAGCG GCGATTTCCAGGTCGACATCAGCGACTCAGACTCCATTCGCGCCCTGTTCGAGAAAACCGGTCGCTTCGACGCGCTGGTCGCCGCGGTCGGCAAGGTGCA CTTCGGCGCCCTGGAGGAAATGGGCGAGGCGCAATACCAGCTCGGCCTGCGCGACAAGCTGATGGGCCAGGTCAACCTGGTACTGCTCGGCCGCGAGTAC GCCAACGACGGGGGCTCCTTCACCCTCACCAGCGGCGTGCTCGCCGAGCAGCCGATCCGCTTCGGCAGTTCGGCGAGCATGGTCAACTGCGCCGTCGAGG GCTTCGTCCGCGGCGCAGCCCTGGAGTTGCCGCGCGGCCTGCGCATCAACGCCGTCAGCCCGACCGTGGTCAGCGAGGCGCTGCCCGGCTACGCGCCCTA CTTCCGTGGCTTCAAGCCGGTTCCGGCGGCGGACGCCGCGCTGGGTTACGCACGCAGCGTGGAAGGCGCGCAGACCGGCCAGGTGTACCGCATCTGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGATATTTCTCAGGAGAAGCGGTCGGCGTAGCAGGTCGGCGAACTGCCCGGCTGCTGGCGGTCCAGCTCCTCCTCGAGGAACTCGGCCAGCACCACGGC ATTGTTGTGCTGCTGGTCGTGGGCGCCGTAGAGCAGCGTCAGGGTGCCCTCCCGAGCGCTGTCGAGCAGGCCCCACCAATGTTCCGGGTGCGCCTGCAAC TCGGCGCGGTAGTGTTCGCGGAAGCTGTCGAAGAGTGCCGGATCGTGGCAGAACTGCTTGCGCACCTCGTTGGAGGGCGCCACGTCCTTCAGCCAGTCGT CCATGGCCAGGGCCTCCTTGCGGATGCCGCGCGGCCACAGCCGGTCCACCAGTACGCGCCGGCCATCGGCGGGCGACGCCGGTTCGTATACACGCTTGCA TTGGATCATCGATCGACTCCCTGGTTGCGATGAAGTCCGATCCGGACTTGAGCTAGGCCCGGACGCTCGGTAACGTGGGCGCATTTTCGATGGAGTCTTC
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| Amino Acid Sequence |
>short-chain dehydrogenase
MKIILIGASGTLGKGIDKELGERHEIVRVGHSSGDFQVDISDSDSIRALFEKTGRFDALVAAVGKVHFGALEEMGEAQYQLGLRDKLMGQVNLVLLGREY ANDGGSFTLTSGVLAEQPIRFGSSASMVNCAVEGFVRGAALELPRGLRINAVSPTVVSEALPGYAPYFRGFKPVPAADAALGYARSVEGAQTGQVYRIW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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