Pseudomonas putida HB3267, B479_24740

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0051082 unfolded protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00821
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00821
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0051262 protein tetramerization
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00821
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuh03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuh03060 Protein export 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuh02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature IPR003708 Bacterial protein export chaperone SecB 104 126 2.0E-37
PANTHER PTHR36918 - IPR003708 Bacterial protein export chaperone SecB 1 157 6.0E-62
Hamap MF_00821 Protein-export protein SecB [secB]. IPR003708 Bacterial protein export chaperone SecB 1 152 32.865257
PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature IPR003708 Bacterial protein export chaperone SecB 130 148 2.0E-37
Gene3D G3DSA:3.10.420.10 - IPR035958 SecB-like superfamily 1 159 6.3E-56
PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature IPR003708 Bacterial protein export chaperone SecB 20 37 2.0E-37
Pfam PF02556 Preprotein translocase subunit SecB IPR003708 Bacterial protein export chaperone SecB 12 150 2.3E-54
NCBIfam TIGR00809 JCVI: protein-export chaperone SecB IPR003708 Bacterial protein export chaperone SecB 13 147 2.1E-53
SUPERFAMILY SSF54611 SecB-like IPR035958 SecB-like superfamily 7 149 2.4E-52
PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature IPR003708 Bacterial protein export chaperone SecB 80 100 2.0E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.