Strain | Pseudomonas putida HB3267, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCGGCGAGGCCGGCCGTGGGTTCGCCGTGGTCGCCGACGAAGTGCAGCGCCTGGCCGAGCGCTCGTCATCGGCCACCCGGCAGATCGAAGCGCTGGTGCG CACCATCCAGGCCGACACCAACGAGGCGGTGATCTCCATGGAGCAGACTACCGCCGAGGTGGTGCGCGGTGCCCGCCTTGCCCAGGATGCCGGGGTGGCG CTGGCCGAGATCGAAGGCGTCTCGCAGAACCTCGCCGACCTTATCCACAGCATCTCCGATGCCGCCCAGCTGCAGACTTCGTCTGCCGGGCAGATCTCCC ACACCATGGCGGTCATCCAGCAGATTACCGCGCAGACCTCCGCCGGCTCCGGCGCCACTGCCGACAGCATCCGCCACCTGGCACGCATGGCCAGCGAGAT GCGCCGTTCGGTGTCCGGGTTCACCCTGCCGCCACCAGCAGAGCCCAAGTGAAGAGCCCTACTGATGAGCTCTACTGAAAAGCCGCGCCGAGGAATGCCC
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DNA Sequence for Gene |
>B479_24405
ATGGCTGTAGCAGCTGTAAGCCCCGAGCGCCACGACACCGTGGCGCTGGCCTGGACCAAAGCCGCCATCCTCGACTGCCTGGGCCAGGCGCGCCAGGCGC TGGAGCGCTTTGCCGGCGAGCCTGGCGACCTGTCGATGCTGGCATTCGTGGTAGACAACCTGCACCAGGTGCACGGCTGCCTGCGCATGCTCGAACTGCG CGGTGCCACGCGCCTGGCTGAAGAACTGGAGCTGTTCGCCAAGGCCCTGGCCGATGGTCAGGTCAGCCCCCGCGGTGATTGCCTGGGCGCTTTGTTTCGC GGCCTGGAGCAACTGCCGTCGTATCTGGAGCGCCTACGCGGCGCCCGCCACGACCTGCCACTGGTGATGCTGCCGCTGCTCAACCAACTGCGTGCCTGCC GTGGCGAGGAGCCGTTGGCCCAGGCCAGCCTGATCAGCGGCGCCACCCAACGCTTTGCCGGTGCCGACGACCTGGCCAACCTCGACCTGTCGCTGGGCAA CTGGCGCGAGCAGCTGCAGGCAGGGCCTGGCCGCGATGCCCTGCGCTCGGTGGTGACCGCGCTGTGCGACGACCTGATGCGCATCAAGGAGCGCCTGGAC CAGTTCGTGCGTGGCGATCGCCAGCACAGCGAGCAACTTGATGCCCTGCTGGCACCGCTGCGCCACGTGGCCGACACCCTGGCGGTGCTTGGCTTCCAGC AGCCACGCCGGGTGATCATCGACCAGGTGCTGGCGCTGCAGGCCCTGGCCCAGGGCGAGCGGGCCGTGGACGACGCGGTGTTGATGGATGTAGCGGGGGC CCTGCTGTACGTGGAGGCCACGCTCAATGGCATGGTCGGCCCGCTGGAGGAAAACGGCCAGGGCGGCCTGCCGGGCTCGGACCTGGCCGAAATCCGCCAG CTGGTGTTGAACGAGTCGCTGAATGTGCTGCAGCAGGCCAAGGACCTGATCGGCGATTGCCTGGAATCCGGCTGGCCTCGGCAACGCCTGCAACCTTTGC CAGGGCTGTTGCAGCAGATTCGTGGTGCACTGGCGATGTTGATGCTGCCGACCGTGGCCGAGCTGTTTGCCGGTTGCGCCAGCTATGTGCAGCGGTGGCT GCAGCACCTGGAGGTGGAGCCGCCAGCCGATGAGCTGACGCACTTGGCCGAGGCTCTGAGCGCCGCCGAATGCTACCTGCAATGGCGGGTGGCGGACCCA TTGGCGGATGGCCAGCCCTTCATCGACATGGCGCGCGCCAGCCTGGCGACACTGGGTGTGCACTGCGCGATGGTCGAGGCCACCGCAGGCCAGGATGGCA GCGCTGATGGCATCGATGACGAGCTGCGTGAAGTGTTTCTCGACGAGGCCGGTGAACTGCTGCCTGAAATCGAGCGCCACTGGTTGCGCTGGCGTGCCGA CAACCAGCAGCGCGAGGCACTGGGAGAAGTACGCCGCGCCTTGCATACGCTCAAGGGCAGCGGCCGCATGGTGCATGCCGAGGCGGTGGCCGAGCTGGCC TGGGGCGCAGAACACCTGCTGAACCGGGTACTCGAGGGCCGCAGCGTGCTCAGCCCGGAAGGCGTGGTGGCCCTGCAGCAGGTATTCGTCTACCTGCCCG ACCTGCTGGCCGACTTCGCCGCAGGCCAGTTGCCGCAACTGACGGAAATCGAGCAACTGGCCGGGCACCTGCATGCCCTCGCCGAAAACGATGCCCCGGT GGCGGCCGACATCGACGGCCTCGATCCGCAACTGCTCGACATTTTCCGCAGCGAGGCGCAGGGCCACCTGGCCAGCCTGGATGCTTTCCTGCAGGGCGCC GACGGCCACGATACGCAGGTCAGCGATGGCCTGCAGCGCGCCCTGCACACGCTCAAGGGCAGTGCCGCCATGGCCGGGGTGATGCCGGTCGCCGAACTGG CCACCGCCTTCGACCGCCTGGCACGTGAATACAAGGGCCACCAACTGCCCCTGCGAATGGCCGAGATCGAATGGCTGGAAGCTGCGCGCTCGCTGTTCCA CCTGGGCCTGGTGCAACTCGACAGCACGCCGTTGGCAGCCATCCCCGGTGCCGCAGAACTGATCGAGCAGGTCGGCCAGGCGGTTGACGGGCACCTGGCC AGCTTGCATGACGACCCGCAGCATGGGCGGCGCAGCAAGCGCGACCCGCAATCGATTGCCAGTTTCCTGGCCCAGGCCATGGATATCCTGCTTGATGCCG AGTCGTTGCTGTCGCGCTGGCAGGAACAGCCCGGCCAGCGCGATGCGCTGGACACCCTGCTCGACGAACTGACTACCCTGGGCCACGCCGCGCATCTGGC CGACCTGTGGCAGATGGATGACGTGTGCGAGGCCTTGCTCGACTTGTACGGCGCCGTGGAGGAGGGCAGCCTGCCCGCCGATGCACGGTTCTTCGCCCAC GTGCAGCGGGCCCATGAAGCACTGCTGGACATGCTCGACGAAGTGGCGGCCGGGCAGGACATCCCGCCAAGGCCAGAGCTGGTCGACAGCCTGCGCCACC TGCTTGGCCAGGCCCTGGCACCGGAGGCCACTGGCCTGGTGGGCATCGACACGGTCACGCCGTTGCATCCGGACATGGACCTGGCCGATACCCTTGGCCT GGGGCCTGCGCACAACCCCTTGCTGCCGGTTGTGGCCGAGCCGCTGGTCGAAGAGCCGGAAAGCCCAGGCGAAGAGCTGCTGGAAGTCTTCCTCGAAGAA AGCTCGGACATCGTCGAGAGTGCCGCCGCAGCCCTGGCGCGCTGGCAGGCCGACCCGCGCAACAGTGTCGAGGTGGACAACCTGATGCGCGACCTGCACA CCCTGAAGGGTGTGGCGCGCATGGTCGAAATTGCGCCGATCGGCGACCTGGCCCACGAGCTGGAGTTTCTCTACGAACTGCTGGCCGCAGGCCGTATGCC ACCGAGCGCGCCACTGTTCGCCTTGCTGCAGAACTGCCATGACCGCCTGGCGCACATGCTCGATGCCGTGCGCCTGGGGCAACCGCTGCATGCCGCCACC GCGCTGATCGACTACATCCGCAACTTCAGCTTCTCGGCCCTGGCCGATAGCGCCGCCGGCCAGGGGCCGGTCGAAGCCGCAACCAGTGAGGCCCCGGCGG TGGCACCGGAGCGGGCACCGGGCGACATGGTCAAGGTCGATGCCGAGCTGCTCGACGACCTGGGCAACCTGGCCGGTGAGCACTCGATCATCCGTGGGCG CATCGAGCAGCAGGTGAACGATGCGCAGTTCACCCTCAACGAGATGGAAACCACCCTCGAGCGCATGCGCGACCAGTTGCTGCGCCTGGATATCGAGACC CAAGGGCGGATGTCCAGCCGGCAGCAGTTCGAAGGCGATGCCTATGACGACTTCGACCCGCTGGAAATGGACCGCCACTCGCAACTGCAGCAGCTGTCGC GGGCCTTGTTCGAGTCCGCCTCGGATTTGCTCGACCTCAAGGAAACCCTGGCACAGCGCGCACAGGAAGCCCACAGCCTCCTGCAGCAGCAAGCGCGGGT GAACAGCCAGTTGCAGGAAGGCCTGACCGCTACCCTGATGGTACCCTTCGAGCGCCTGGTGCCGCGCTTGCAGCGTGTGGTACGGCAGGTGGCCAGCGAG CTGGGCAAGCAGGTGGAGCTGGTGGTCGGCAATGCCGAGGGTGAACTCGACCGCAGCGTGCTCGAACGTATGGTGGCACCGCTGGAGCACATGCTGCGCA ACGCCGTCGACCATGGCCTGGAAAGCCGCGAAATGCGCCTGGCTGCGGGCAAGCCGGAGCAGGGCACCATTCACCTGAATCTGCTGCACGAAGGCGCGGA TATCGTTATCGAAATGACCGACGACGGTGCCGGCGTGCCACTGGAAGCGGTGCGCCGCAAGGCCATCAAGCGCGGCCTGCTAGACCCGCAGGCGCAATTG AGCGATCACGAGATCCTTCAATTCATTCTGCGCCCGGGCTTTTCCACTGCCGAGAAGATTACTCAGATTTCCGGGCGTGGCCTGGGCATGGACGTGGTGC ACGAGGAGGTCAAGCAGCTGGGCGGCTCGATGAGTATCGAGTCAGCCCAGGGCAAGGGCGCGCGCTTTCTGATCCGCCTGCCGTTCACCGTGTCGGTGAA CCGCGCGCTGATGGTGCACCTGGGCGAAGAGCAGTACGCCATTCCGCTGAATACCATCGAGGGCATCGTCCGCGTGCCGCCGGCCGAACTGGCGGCGTGC TACCAGCTGGACGCCCCGCGTTATGTGTACGCCGGCCACGAATACGAGCTGCGCTACCTGGGTGAGCTGCTGCAGGGCATGCCGCGCCCGGCATTGCTCG GGCAGAGCGTGCCGCTGCCGGTGCTGCTGGTGCATTCCCAGGAGCAGTCGTTCGCCATCCAGGCCGATAGCCTGTCGCCCAGCCGCGAGATCGTGGTGAA GAGCCTGGGGCCGCAGTTTGCCGCAGTTGCCGGGTTGTCGGGGGCAACGCTGTTGGGCGATGGTCGGGTGGTACTGATTCTCGACCTGCTGGGCCAGTTG CGTGGCCAGCAGCGGCGCCTGGCGCGCCTGCCGGGTGGCGGTGCGGCTCGGCGCCAGGTGTTCGGCCCGGCGCCACGGCGGGCGTTGCTGGTAATGGTGG TGGACGATTCGGTGACTGTGCGCAAGGTCACCAGCCGCCTGTTGGAACGCCACGGCATGAGTGTGCTGACGGCCAAGGACGGGGTCGATGCAATGGCCCT GCTGGAAGAACACCGCCCCGATGTGTTGCTGCTGGACATCGAGATGCCGCGCATGGACGGCTTCGAGGTGGCCACACGTATCCGCCGTGATGAACGACTG AAAGACTTGCCGATCATAATGATTACTTCGCGCACCGGGCAGAAGCACCGCGACCGTGCCATGGCCATCGGCGTCAACGAATACCTGGGCAAGCCGTACC AGGAGTCGGTCCTGTTGCAGAGCATTGCCCACTGGAGCCAGACCCATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACTGATCGCCGGCCAACGCAGCAGCCTGACCGGGCTTTTGCTGCCGTTGGGCGACCGTACCCTGGTGTTGCCCAACGTGGCGGTGGCGGAGTTGAGTGGC CAGCGCAACGTGGTGTGCCAACGCGGCGAGCCGGCCTGGCACCTGGGCTGGATCGACTGGCGCCAGCAGCGCCTGCCGCTGATCGGCTTCGAAGCCGCGT GCGGTGGCGAGACACCCTGCGGCGAGCGGGCACGCGTGGTGGTGCTCAATGCCTTGGGTGATACCGGCCTGCGCTACCTGGCGTTGTTGCTGCAGGACAT ACCGCGCTCCTGCAAGCTGGACAGCCAGCTGAACTACGTGGACGTGGCGCTGGGTCGCCTGGAACTGGCGGCGGTGCAGGTGGGCGAACAGGTAGCGCGG GTGCCGGACCTGGTCGGGCTGGAACGGCTGGTGCGTGACGCGGAACTGCAACCTGAGATTGGTTAGGATGTAAGGCACAGGGCCCTTTCGCGGGCACGCC
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Amino Acid Sequence |
>CheA signal transduction histidine kinase
MAVAAVSPERHDTVALAWTKAAILDCLGQARQALERFAGEPGDLSMLAFVVDNLHQVHGCLRMLELRGATRLAEELELFAKALADGQVSPRGDCLGALFR GLEQLPSYLERLRGARHDLPLVMLPLLNQLRACRGEEPLAQASLISGATQRFAGADDLANLDLSLGNWREQLQAGPGRDALRSVVTALCDDLMRIKERLD QFVRGDRQHSEQLDALLAPLRHVADTLAVLGFQQPRRVIIDQVLALQALAQGERAVDDAVLMDVAGALLYVEATLNGMVGPLEENGQGGLPGSDLAEIRQ LVLNESLNVLQQAKDLIGDCLESGWPRQRLQPLPGLLQQIRGALAMLMLPTVAELFAGCASYVQRWLQHLEVEPPADELTHLAEALSAAECYLQWRVADP LADGQPFIDMARASLATLGVHCAMVEATAGQDGSADGIDDELREVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAELA WGAEHLLNRVLEGRSVLSPEGVVALQQVFVYLPDLLADFAAGQLPQLTEIEQLAGHLHALAENDAPVAADIDGLDPQLLDIFRSEAQGHLASLDAFLQGA DGHDTQVSDGLQRALHTLKGSAAMAGVMPVAELATAFDRLAREYKGHQLPLRMAEIEWLEAARSLFHLGLVQLDSTPLAAIPGAAELIEQVGQAVDGHLA SLHDDPQHGRRSKRDPQSIASFLAQAMDILLDAESLLSRWQEQPGQRDALDTLLDELTTLGHAAHLADLWQMDDVCEALLDLYGAVEEGSLPADARFFAH VQRAHEALLDMLDEVAAGQDIPPRPELVDSLRHLLGQALAPEATGLVGIDTVTPLHPDMDLADTLGLGPAHNPLLPVVAEPLVEEPESPGEELLEVFLEE SSDIVESAAAALARWQADPRNSVEVDNLMRDLHTLKGVARMVEIAPIGDLAHELEFLYELLAAGRMPPSAPLFALLQNCHDRLAHMLDAVRLGQPLHAAT ALIDYIRNFSFSALADSAAGQGPVEAATSEAPAVAPERAPGDMVKVDAELLDDLGNLAGEHSIIRGRIEQQVNDAQFTLNEMETTLERMRDQLLRLDIET QGRMSSRQQFEGDAYDDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLAQRAQEAHSLLQQQARVNSQLQEGLTATLMVPFERLVPRLQRVVRQVASE LGKQVELVVGNAEGELDRSVLERMVAPLEHMLRNAVDHGLESREMRLAAGKPEQGTIHLNLLHEGADIVIEMTDDGAGVPLEAVRRKAIKRGLLDPQAQL SDHEILQFILRPGFSTAEKITQISGRGLGMDVVHEEVKQLGGSMSIESAQGKGARFLIRLPFTVSVNRALMVHLGEEQYAIPLNTIEGIVRVPPAELAAC YQLDAPRYVYAGHEYELRYLGELLQGMPRPALLGQSVPLPVLLVHSQEQSFAIQADSLSPSREIVVKSLGPQFAAVAGLSGATLLGDGRVVLILDLLGQL RGQQRRLARLPGGGAARRQVFGPAPRRALLVMVVDDSVTVRKVTSRLLERHGMSVLTAKDGVDAMALLEEHRPDVLLLDIEMPRMDGFEVATRIRRDERL KDLPIIMITSRTGQKHRDRAMAIGVNEYLGKPYQESVLLQSIAHWSQTHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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