Pseudomonas putida HB3267, B479_18615 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida HB3267, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAGGTGCTGCAGGCGCTGTTATCGGAACAGGTACCCGTACGCGATATCCGCAGTATCGCCGAGGCGATCGCGAACAACGCCGGCAAGAGTCAAGATACCG CCGCGCTGGTGGCGGCGGTGCGCGTCGGATTGTGTCGCGCCATCGTGCAAAGCATTGTCGGCGTTGAGTCGGAGCTGCCAGTGATTACCCTGGAGCCAAG GTTGGAACAGATTTTGCTCAATAGTCTGCAAAGGGCCGGGCAAGGTCAGGAAGACGGTGTTCTTCTGGAGCCGAGCATGGCCGAGAAGCTGCAGCGTTCG CTGATCGAGGCGGCCCAGCGCCAGGAAATGCAGGGCCAGCCGGCCATCCTCCTGGTCGCCGGCCCGATCCGCGCCATGCTGTCGCGTTTCGGCCGCCTGG CTGTACCGAATTTGCATGTTCTGGCGTATCAGGAAATACCGGACAACAAGCAAGTCACCATCATTGCCACCGTGGGCCCTAACGGCTGAGGTAGGGGATA
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| DNA Sequence for Gene |
>B479_18615
|flhF
ATGCAAGTTAAGCGATTTTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTCCGTGATGAGCTGGGCGCCGATGCCGCCATCATCGGCAACCGTCGCA TCGCCGGCGGTGTCGAGCTGACGGCCGCGCTGGACTACAAGCTGTCCGCCCTGGCCCCCCGTGTGCCCAACGCCGAACTGGAAGAAGAGCTGCGCAAGAC CCATACGCGCATCGCCACTGCCCAGGCCGAGCTGGGCCACCGCCAGGATAGCAGCGACAACAACCGCCAATTGTTCGCCGGGCAGTCGCTGACCGCCGCC GAGCCGTTGATCGAACCGCATGTCGATGTTCCCGAGGCTGCTGCAGCGCCTGCGTCGGCGCCGGTCGACCCGCGCCTGTTCGATGCCATGCGCTCCGAGC TGTCGGGCCTGCGCGAGCTGCTGGAAGTGCAGCTCGGCTCGCTGGCCTGGAACCAGCTGCAAGGCAGCAAGCCGCAGCAGGCCACCGTCTGGCGCCGGCT GCAGCGTATCGGCCTGTCCGGGCCGATCGCCCGTGAGCTGCTGGACCTGACTGCCGAGATCGACGAGCCACGCCAGGCCTGGCGCATGTTGCTTGCGCAT CTGGCGCGGATGATCGAAATCCCCGAGGTCGAGCCGATCGAAGAGGGTGGGGTGATTGCCATGGTCGGCCCGGCCGGCATGGGCAAGACCACCACCCTGG CCAAGCTGGCCGCCCGCTACGTGCTCAAGTACGGCGCGCAGAACCTGGCGCTGGTGAGCATGGACAGCTTCCGCATTGGCGCCCAGGAGCAGCTCAAGAC CCTGGGCCGCATCCTCAACGTGCCGGTGACCTACGTCGACCCGGGCCAGTCGCTTGCTGCGGCGCTGGAGCCGCTGCTGCGCAAGCGCGTGGTGCTGATC GATACCGCCGGCCTGCAGGCCAGCGACCCGGCCCTGCGCATGCAACTGGATACCCTGGCCGGGCGTGGCATTGCCGCGAAGAACTACCTGGTGCTGGCCA CCACCAGCCAGAAGCAGGTGCTGACCGCCGCCTACCACAGCTACAAGCGCTGCGGCCTGGCCGGTTGCATCCTGACCAAACTCGATGAAACGGCGAGCCT TGGCGATGTGCTGAGCCTTGCCATCAGTCATGAACTGCCAGTGGCCTACCTGACCGACGGGCCGCGCATTCCTGACGACCTGCACCTGCCTCGGGGGCAC CAGTTGGTCTCCCGCGCGGTCAATGTGCAGCAGCAGGACGAGCCCAGCGAAGAGGCCATGGCCGATATGTTCGCTGATCTCTATCACAACCCACGGCGAG CGGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGATGAAATGTGTGCAAGGTAGCTATGCCAAGGGGTACGCAGAATTGCCCTACGTGTGGCCTGAGTCCCAGCGAGACAAGGTAAAGAACAGACATGGGTA GCATGCATCCCGTACAGGTGATCGCCGTGACCGGTGGCAAAGGTGGCGTCGGCAAGACTAACGTTTCAGTGAACCTGTCCCTGGCGCTGGCCGAGCTTGG CCGCAGGGTCATGCTGCTCGACGCCGACCTGGGCCTGGCCAATGTCGACGTGCTGCTGGGCCTTACCCCCAAGCGGACCCTGGCCGATGTCATCGAAGGG CGCTGCGAGCTGCGCGACGTGATGTTGCAGGGCCCCGGTGGTGTGCGCATCGTGCCGGCTGCCTCGGGCACGCAGAGCATGGTTCACCTGGCCCCGGCCC AGCATGCCGGGCTGATCCAGGCGTTCAGCGAAATCGGCGACAACCTCGACGTGCTGGTGATCGACACTGCGGCCGGTATCGGTGATTCGGTGGTCAGCTT
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGADAAIIGNRRIAGGVELTAALDYKLSALAPRVPNAELEEELRKTHTRIATAQAELGHRQDSSDNNRQLFAGQSLTAA EPLIEPHVDVPEAAAAPASAPVDPRLFDAMRSELSGLRELLEVQLGSLAWNQLQGSKPQQATVWRRLQRIGLSGPIARELLDLTAEIDEPRQAWRMLLAH LARMIEIPEVEPIEEGGVIAMVGPAGMGKTTTLAKLAARYVLKYGAQNLALVSMDSFRIGAQEQLKTLGRILNVPVTYVDPGQSLAAALEPLLRKRVVLI DTAGLQASDPALRMQLDTLAGRGIAAKNYLVLATTSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGDVLSLAISHELPVAYLTDGPRIPDDLHLPRGH QLVSRAVNVQQQDEPSEEAMADMFADLYHNPRRAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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