Pseudomonas aeruginosa 3577, AJ64_04880 (algL)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3577 adTvG-supercont1.25, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGAATTCCACAAGAACCCGCCGAAGATCCTCATCTGGGAATTCGCCACCCACTACGACATGGCGCAGAAGAGCTTCTACCGCCAGGCCATGCCGCTGGT GGACAACGGCTGCTCCGGCCGGAAGACCGTACTCAGCCGCAAGGTCAAGCTGCGCCAGGGCCGCAACGAGGTGCTGCTGAACAGCGCCGCGCTACCGATC CGTAGCGGCAGCTACGTCGCCGACGTGACCTACAGCGACCCTTCGGTACACGAGTTGAAGAACACCATCTGGTACATGAACGGCCGCCGCGAGCAGTTGA AGATCGAGCAGTCGAAAGCCGTCGATACCGGCGGCCGCTACGTCTTCCAGCTGCGCAACGACAGCGACTGGGCCGACCAGCAGTTCCTTTCCCTGGAAAT CGAAGCGCCGGAGGACATGCCCCAGGGCCTGGAGGTCCAGGCCAGCATCTGCCAGGCGGCGCCCGCCAAGGCCAGCCAGTCGGTGGCCGGGAGGTAAACG
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| DNA Sequence for Gene |
>AJ64_04880
|algL
ATGAAAACGTCCCACCTGATCCGTATCGCCCTGCCCGGTGCCCTCGCCGCGGCATTGCTCGCCAGCCAGGTCAGCCAGGCCGCCGACCTGGTACCCCCGC CCGGCTACTACGCGGCGGTCGGCGAGCGCAAGGGCAGCGCCGGCAGTTGCCCCGCGGTGCCGCCGCCGTATACCGGCAGCCTGGTCTTCACCAGCAAGTA CGAAGGCTCCGATTCGGCGCGGGCGACCCTCAACGTCAAGGCGGAGAAGACCTTCCGCTCGCAGATCAAGGACATCACCGACATGGAGCGCGGCGCCACC AAGCTGGTCACCCAGTACATGCGCAGCGGCCGCGACGGCGACCTGGCCTGCGCACTGAACTGGATGAGCGCCTGGGCCCGCGCCGGCGCCCTGCAGAGCA ACGACTTCAACCACACCGGCAAGTCCATGCGCAAATGGGCGCTGGGCAGCCTCTCCGGCGCCTACATGCGCCTGAAGTTCTCCAGCTCGCGGCCGCTCGC GGCCCACGCCGAGCAGAGCCGGGAAATCGAGGACTGGTTCGCCCGGCTCGGCACCCAGGTAGTCCGCGACTGGAGCGGCCTGCCGCTGAAGAAGATCAAC AACCATTCCTACTGGGCGGCCTGGTCGGTGATGTCCACCGCGGTGGTGACCAACCGCCGCGACCTCTTCGACTGGGCGGTGAGCGAGTTCAAGGTCGCCG CCAACCAGGTCGACGAGCAGGGCTTCCTGCCCAACGAACTCAAGCGCCGCCAGCGCGCCCTCGCCTACCACAACTATGCGCTGCCACCGCTGGCGATGAT CGCCGCGTTCGCCCAGGTCAACGGCGTCGACCTGCGCCAGGAGAACCACGGCGCCCTGCAGCGCCTGGCCGAGCGGGTGATGAAGGGAGTCGACGACGAG GAAACCTTCGAGGAGAAGACCGGCGAGGACCAGGACATGACCGACCTCAAGGTCGACAACAAGTACGCCTGGCTGGAGCCCTACTGCGCCCTCTACCGCT GCGAGCCGAAGATGCTCGAGGCGAAGAAGGACCGCGAGCCGTTCAACAGCTTCCGCCTCGGCGGCGAAGTGACGCGGGTGTTCAGCCGCGAAGGGGGAAG TTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGCGTGGCGGGAAGCGGGCGCACAGGCCGGGGGCCACGCGCCCCTCTACCCCGCTCGCCGACCAGGCGTCCCACCAGGCGCCACACCCCGACCCATGCG CGACAGACGCGGGCGGGCGCAACACCTTAGGCAACACCACGGGGAGGAAAACGGCGGGTCGTCCCGCCTTTCCTCGAGCGCTCCAGGGCGCGGAAAGGCA GGGCCGACCTGAATGGTTGACGCTCTAGAGAGAGAGACGGCATGGTCTTTTCTTCAAACGTGTTCCTGTTCCTGTTCCTGCCGGTCTTTCTCGGCCTGTA CTACCTGAGCGGCGAACGTTACCGGAACCTGCTGCTGCTGATCGCCAGCTACGTGTTCTACGCCTGGTGGCGGGTGGACTTCCTCCTGCTGTTCGCCGGG GTCACCGTCTTCAACTACTGGATCGGCCTGCGCATCGGCGCCGCCGGCGTACGCACCAGGGCCGCGCAACGCTGGCTGATCCTCGGCGTGGTGGTCGACC
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| Amino Acid Sequence |
>poly(beta-D-mannuronate) lyase
MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERKGSAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGAT KLVTQYMRSGRDGDLACALNWMSAWARAGALQSNDFNHTGKSMRKWALGSLSGAYMRLKFSSSRPLAAHAEQSREIEDWFARLGTQVVRDWSGLPLKKIN NHSYWAAWSVMSTAVVTNRRDLFDWAVSEFKVAANQVDEQGFLPNELKRRQRALAYHNYALPPLAMIAAFAQVNGVDLRQENHGALQRLAERVMKGVDDE ETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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