Pseudomonas aeruginosa 3577, AJ64_04706
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3577 adTvG-supercont1.23, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCGCCCGAAAGGCGGCCCCGGCCAGCCTTGATCAGATCAAGCTGGCCGGGGCCGTCTTTGTCCACTTCGTTGCCGGTCGTACCGAAATCCAGGGGAAC GGTGATCTTGCTGTCGAAGGAGAGGATGCGGTCCTGCAATTCCTCTGCATGCTTCATGACTTTGCGTGGGTAGCTGGCGCTGCTCGGCCCGAAAGCTTTC CAGGCCAGCAGGCCTGCGCCGACGAGAGTAATGAAGAGGATCGGTAAGCCTAAGTAGAGGGCCTTGCTTGTACGTGGTCTGGTCATTGCCATCTCAGTCA GGGTCGAGATCGAGGAGCGCCGGCGGTTGCCTGTCGAAGCGGGCCCACCTGTCAGGGAGGAACGAGGCGGGAGAGGGAAAATTTAGCCATGGCCCCTCTC GACCATGGTGTCGAGGCTTGGTGGCGTGCCAGTAAATTTGCCGACGGACGGAACGTTCTAGCTGGATAAAGCGGGCTTCGCGGTTGACACAGGTAGGACG
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| DNA Sequence for Gene |
>AJ64_04706
ATGACGGTTTCTCGACGAGGTTTCATGGCCGGCTTGGCGCTGACCGGAGCGGCGGCGTTGCCGGTGGCTTACTACACCCGCCGTCACTTGGCCCGCGAAG AAGAGGAACCGCCCACGGCCGACGAGGCCGTGCTCGATCTGGCCGATACCGCGGGTATGCGCCTGGGTGGTCGCTTGCGTGGGGTGTGGGACCTGCGTCT GGTCGGTGCTGATGCTGGCTTGCCCGGCCTGCCGGCGGAAGGCTTGCAAATGGTGCTGGATGTCGCTCCCAAGGGGCGTGGCCTGATTGGCTATCTCGAT ACTCCTACACGACTGCTGTCGAGCGATGAGCCCAGGTTCCGTGTGAGCGGCGACCTCGTTGGAGCCAGTTCGGCGCGAATTCGCTGGCGCCTGGTCGACC AGGCTTCGGCGTCGATGGCGCCGACCCATGACTGCTCCGCAGTATTTGATGAAGTCTGGGATAATTTCGCCAATGCCGGGGACGGCACGCTGAGCGGGCA TATCTTGCGCCTGGATCGTTCTCCGGGGCTGCCGGAGGAAGATTTCCGCTTCGTAGCGGTCAAGCGACACTTTCCGCCAGCTCGCGAACGCATCGCTCTC AACGAGAAATTGCTGGGATGGTTAGTGTCGCCGCAGCACCGGTTGTTCCACCAGCTATGGCACGCCTCGCGGGACAAGTGGCATCAACTGTCGGAGAAGC AGCGCAATGCGTTGCGTGGGGTGGGCTGGCAGCCTGGCCCGCTGGACCGGGAGCGCGATGCGCGGGGGCCAAGAAAGGATCGCAACGCTTCTGGTATCGA CTTCCTTTTCATGCATCGGCATATGCTGCATACCGCACGATCCATGCAAGACCTGCCATCCTGGAAGCGTTTGCCGCGCCCCGCGGTTCCGCTGGAATTC GATCGTCCCGGCTTCATCCGCTACTTCGACAATCCAGATGGTTTCTCCGTGCCGCCGGCCTGGGTAGCGGTCGGGGACGACGAATACAGCGAATGGCTGC GTGGGTTGAAAAGCGCAGAAGCGTACCATTCCAATTTCCTGGCCTGGGAGTCGCAGTACCAGGATCCGGAATATCTGGCGAAGTTGACCCTGGGACAGTT CGGCTCGGAGATGGAGCTGGGTATGCACGATTGGTTGCATATGCGCTGGGCGACCGTGACCCGCGACCCATCCAACGGGTCGCCGGTCATGGGCGACCGC GTCCCGTCGGATTTCTCGCCGCGCTGGTTCCGCCCGGAGAACGATTTCCTCGGCGATCCGTTCTCGTCCCATGTGAATCCCGTGTTCTGGTCCTTCCATG GCTGGATCGACGACCGTATCGAGGATTGGTACCGTGCCCACGAGCGTTTCCATCCCGGCGAAGTTCGGCGTCGAGAGGTGCAGGGTATTCCCTGGTTTGC GGCTGGGCGCTGGGTGGAGGTGGACGACCCTTGGCTCGGCCCGGCGACCCATGGTTGCGGCCTGTCGGATCTGCAGGCGAGCAGCAATTCGGTGGAGCTG GACGTGGAAACCATGAAGCTGGCGGTACGCATCATCTTCAGCGAAGAAGACCGGTTGAGCGGCTGGCTCAAGCGTGCGCCGCGGCGGCCCTGGTACGCGC GCAACCTGAAGCTGGCGCGCGACCAGCTCAGGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGGCGAAAGAGCGAGTAAGGATGGAGGAGGCCCGCGCAACGCGGGCCTCAGTCTTTCCGCGCGAGACCCTGGCGGTCGCTCTGCCAGCCGCCGCCGAGG GCCTTGTACAGGCCGACCGAGGCCTGCAGGCGGGCCAGTCGCAGTTGCACGGCGGCATCCTGCGCCGCGTACAGCGTGCGTTGCGTTTCGAGGACCGTCA GCAGGGTTTCCGCGCCGGCCTGGTAGCGGCTGTCGGAGAGATCGAAGGCGCGCTGCGCCTGCTCAAGCTCCTGCTGCTGCCAGTGCAGCTGGCGGTCGAG GCCGTCGATGCTGTTCAGCGAGCGTTCGGTGTCGGCAAAGGCGGTGAGGATCGCCTTGCGGTAGGTTTCCAGCAGTTCTTCCTGGCGCGCCAGGCTGCGG TCGCGCTCGGCGCGCAGGCGGCCGTGGTTGAAGATCGGGGCGAGCAGGTTGGCGCCCAGGTTGTAATAGGGGTTGCGGAAAGTGTCGGCGGCGCGGTTGG
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| Amino Acid Sequence |
>PvdJ/PvdD/PvdP-like protein
MTVSRRGFMAGLALTGAAALPVAYYTRRHLAREEEEPPTADEAVLDLADTAGMRLGGRLRGVWDLRLVGADAGLPGLPAEGLQMVLDVAPKGRGLIGYLD TPTRLLSSDEPRFRVSGDLVGASSARIRWRLVDQASASMAPTHDCSAVFDEVWDNFANAGDGTLSGHILRLDRSPGLPEEDFRFVAVKRHFPPARERIAL NEKLLGWLVSPQHRLFHQLWHASRDKWHQLSEKQRNALRGVGWQPGPLDRERDARGPRKDRNASGIDFLFMHRHMLHTARSMQDLPSWKRLPRPAVPLEF DRPGFIRYFDNPDGFSVPPAWVAVGDDEYSEWLRGLKSAEAYHSNFLAWESQYQDPEYLAKLTLGQFGSEMELGMHDWLHMRWATVTRDPSNGSPVMGDR VPSDFSPRWFRPENDFLGDPFSSHVNPVFWSFHGWIDDRIEDWYRAHERFHPGEVRRREVQGIPWFAAGRWVEVDDPWLGPATHGCGLSDLQASSNSVEL DVETMKLAVRIIFSEEDRLSGWLKRAPRRPWYARNLKLARDQLRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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