Pseudomonas aeruginosa 3577, AJ64_04250
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3577 adTvG-supercont1.18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGTCGGCTACGCGGCGGTGATGCTGGCGATGATCGGCGCCTTCGTCGTCGCCCTGGATGCCCGCCCGCTGGCCTCGCTGGACGTGACCCGCGACCGT GGGCTGTTCCGCGAGAACGCCGCCGGGCAGATCGAGAACATCTACACCCTCAAGGTCATCAACAAGACCCAGCAGCCGCAGCGCTATCGCCTGCAACTCG ACGACGCACCGGAGTTCCGCCTGCAGGGCGAGCACACCCTGAGCCTGAAGCCCGGCGAGATCCTCGACTTTCCGGTGTCGGTGGCCTCTACCGCCGAACG CGCCAGGGCCGGCTCGCAACCGCTGGCGTTCAGCCTGCGCGGCATCGACGACCCGAGCCTGGCGGTCGGCAGCACCAGCACCTTCGTTTCGCCGGCGCGC TGAGGAGGCCGCGATGAGGCATGACAACACGGTCCCGGCGCGCATAGAGTGGGCGCCAGCGGCCGTGCCCACGGCCAGCCAGGACAGCGGCCAGGACAAG
|
|
| DNA Sequence for Gene |
>AJ64_04250
ATGAAGCGCTACGAGAAATTCGCCGACGAGATTGCTGAGCTGATCCGCACCGGCGTCCTCGCCCCCGGGCAGAAGGTGCCCTCGGTACGGCACGCCAGCC GTACCTACGGGGTCAGCGCTTCAACCGTGTTCCAGGCCTACTACCTGCTGGAAAGCCGTGGGCTGATCATGGCCCGCGCACGCTCCGGCTACTTCGTCTG CCAGCACGTGCAGCGGCCGCTGCCGGAACCGGAGATCAGCCCGCGCCAGGCCGACGCCACCGAGGTCGACGTCAGCGAGCTGGTGTTCTCCGTACTCAGT TCGATCAAGGACCCGGACACCGTGCCCTTCGGCTCGGCGTTCCCCAGTCCGCAACTGTTTCCCCTGCCGCGCCTGGCGCGCTCGATGGCCCATGCGGTGC GCGACATGGACCCGCAGTCGGTGGTCGCCGACATGACGCCGGGCAACCATGGCCTGCGCCGCCAGATCGCCCTCCGCTACATGGTCGGCGGCCTGCTGCT GCCGGTGGAAGAACTGGTCATCAGCAACGGCGCGCTGGAGGCACTCAACCTCTGCCTGCAGGTGGTCACCCGTCCCGGCGACCTGGTGGCCATCGAGGCG CCGGCGTTCTACGCCACCCTGCAGGTGCTGGAACGGTTGAAGCTGAAGGCGGTGGAAATCCCCGTGCATCCGCGCGAAGGCATCGACCTGGAAGTGCTCG CCGACAGCCTGGAGCGCCTGCCGATCAAGGCCTGCTGGTTCATGAGCAACTTCCAGAACCCGATGGGCGCGAGCATGGACGACGAGAAGAAACGCGCCCT CGCCGAGCTGCTGGCGCGCCACCAGGTGCCGATGATCGAGGACGACGTGTACGCCGAACTGTACTTCGGCCAGCAGGCGCCGAAACCGGTCAAGGCCTAC GACCAGGAAGGCCTGGTGATGCACTGCAGTTCCTTCTCCAAGAGCCTGGCGCCGGGCTACCGGGTCGGCTGGGTGGCCGGCGGACGCTACGCCGAGCAGA TCGAGCGACTGAAGCTGATGACCAGCCTGTCGGCGTCGATCCCGGCCCAGGCGGCCATCGCCGACTATCTCCAGCACGGCGGCTACGACCGCCACCTGCG CAAGCTGCGCTACGCCCTGGAGACCCAGCAGAACGCCATGCTCGCGGCGGTGGCGCGTTACTTCCCCGAGCAGACCCGGGTCAGCCGTCCCAGCGGCGGC TACTTCCTCTGGCTGGAGTTGCCCGAGGCGGTCGACTCGCTGCGCCTGTTCCAACTGGCCCTGGCCCAGGGCATCAGCCTCGCCCCGGGGCCGATCTTCT CCGCCACCCGCCGCTTCGCCCATTGCGCCCGGCTCAACTACGGGCACCCGTGGAGCGCGCGGCAGGAGAAGGCGATGGAGACCCTCGGGCGGATCGCCCA GTCGCTGGCGGGATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGCCCCGCACACGGAAAGCCACTCCGGAGTAGGGCGGATAACCGCGCGCGGTCATCCGCCATGATCGGCTCGCGTCCCCCATCCCGGTATGCGCCGCCGC CCTGCGCGAACGCCTTCCCCTGCCCCATCTGATACCCAAATTCCATATCGACCTGAAGCTGTTTTACCCCCGCCCCAGCCCTTAGATTGCAGGCTCCGGC TGGCGCCCCGTCTCCCCCCTCGACGGCGGTCGCCGGCTGTTCATTTCTTTCGGGACTGTACAGATGAACAAAGCAACGACGGAACCTGCCTACAACTACA AGGTGGTTCGCCAGTTCGCCATCATGACCGTGGTATGGGGCGTGATCGGCATGGGGTTGGGCGTACTGATCGCCTCGCAACTGGTCTGGCCCCAGATGAA CTTCGACCTGCCCTGGACCAGCTTCGGCCGCCTGCGGCCGCTGCATACCAACCTGGTGATCTTCGCCTTCGGCGGCTGCGCGCTGTTCGCCACCAGCTAC
|
|
| Amino Acid Sequence |
>GntR family transcriptional regulator
MKRYEKFADEIAELIRTGVLAPGQKVPSVRHASRTYGVSASTVFQAYYLLESRGLIMARARSGYFVCQHVQRPLPEPEISPRQADATEVDVSELVFSVLS SIKDPDTVPFGSAFPSPQLFPLPRLARSMAHAVRDMDPQSVVADMTPGNHGLRRQIALRYMVGGLLLPVEELVISNGALEALNLCLQVVTRPGDLVAIEA PAFYATLQVLERLKLKAVEIPVHPREGIDLEVLADSLERLPIKACWFMSNFQNPMGASMDDEKKRALAELLARHQVPMIEDDVYAELYFGQQAPKPVKAY DQEGLVMHCSSFSKSLAPGYRVGWVAGGRYAEQIERLKLMTSLSASIPAQAAIADYLQHGGYDRHLRKLRYALETQQNAMLAAVARYFPEQTRVSRPSGG YFLWLELPEAVDSLRLFQLALAQGISLAPGPIFSATRRFAHCARLNYGHPWSARQEKAMETLGRIAQSLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|