Pseudomonas aeruginosa 3577, AJ64_03703
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3577 adTvG-supercont1.15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCGAGCCGAAGACCGGCTTCATGCTGATCGACACCCTGCTTTCCGACGAACAGGGCTCGTTCCTCGATGCCGTGCGCCACCTGATCCTGCCGGCCATCG TGCTGGGCACCATCCCGCTGGCGGTGATTGCCCGCATGACCCGCTCGGCGATGCTCGAGGTGCTGCGCGAAGACTATGTGCGCACCGCCCGCGCCAAGGG CCTGTCGCCGGCCCGGGTGGTCTTCGTGCACGCCCTGCGCAACGCGCTGATTCCGGTGCTGACGGTATTCGGCCTGCAGGTCGGCACGCTGCTCGCCGGC GCGGTGCTGACCGAAACCATCTTCTCCTGGCCGGGCATCGGCAAGTGGCTGATCGACGCCATCAGCCGTCGCGACTACCCGGTGGTGCAGAACGGCATCC TGCTGGTCGCCACCCTGGTCATCCTGGTCAATTTCGTCGTGGACATCCTCTACGGCCTGGCCAACCCGCGCATTCGCCACCAACGCTGAGGAGGCAGCCG
|
|
| DNA Sequence for Gene |
>AJ64_03703
ATGAACGCCATGCACAACGCTCCCGCCAGCGACCCGAGCCTGGTCTACCCGTCCCCGCTGAAGGAATTCTGGCAGGCCTTCGCGCACAACAAGGGCGCCC TCGGCGGCCTGCTGTTCATGCTGCTGATCGTGTTCTGCGCGCTATTCGCCCCCTGGGTCGCCCCCTACGATCCGAGCGAGCAGTTCCGGGACTTCCTGCT GACCCCGCCATCCTGGCTGGAAGGCGGCCAGGCGCGCTTCCTGCTCGGCACCGACGAGCTGGGCCGCGACCTGCTCTCGCGGCTGATCCACGGCGCCCGC CTGTCGCTGCTGATCGGCCTGTCCTCGGTGGTGATCTCGCTGATCCCCGGCATCCTCCTCGGCCTGCTCGCCGGCTTCTCGCCGAACCGTGCCGGGCCGC TGATCATGCGCCTGATGGACATCATGCTGGCGCTGCCGTCGCTGCTGCTGGCGGTGGCCATCGTGGCGATCCTCGGCCCGGGCCTGATCAACACCGTGAT CGCCATCGCCATCGTCTCGCTGCCGGCCTACGTACGCCTGACCCGCGCCGCGGTGATGACCGAGCTAAACCGCGACTACGTCACCGCCTCGCGCCTGGCC GGCGCCGGCACCCTGCGACTGATGTTCGTCTGCGTGCTGCCGAACTGCATGGCGCCGCTGATCGTCCAGGCCACCCTGAGCTTCTCTTCGGCGATCCTCG ACGCCGCCGCCCTCGGCTTCCTCGGCCTCGGCGTGCAACCGCCGACCCCCGAGTGGGGCACCATGCTCGCCTCCGCCCGCGACTACATCGAGCGCGCCTG GTGGGTGGTCAGCCTGCCCGGCCTGACCATCCTGCTCAGCGTACTGGCGATCAACCTGATGGGCGATGGCCTGCGCGACGCCCTCGATCCGAAACTGAAG AACGCGGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGAGCACAACCATGAACAGCGCATCCGTATCCGCGCCACAGGAGACCGCCGCATGAGCCTCCTCGATATCAAGAACCTCAGCGTACGCTTCGGCGACACC ACCGCCGTGCCCGTGGTCGACGGCCTCGACCTGAGCGTCGACAAGGGCGAGGTGCTGGCCATCGTCGGCGAGTCCGGCTCCGGCAAGTCGGTGACCATGA TGGCCCTGATGGGCCTGATCGACGCCCCCGGCTGGGTATCCGCCGATCACCTGCGCTTCGACGGCCACGACATGCTCACCCTCAAGGGCCGCCAGCGCCG GCGCATCGTCGGCAAGGACATGGCGATGGTCTTCCAGGACCCGATGACCGCCCTCAACCCCAGCTACACCGTCGGCTACCAGATCGAGGAAGTCCTCCGC CTGCATCTCGGCCTGCGCGGCAAGGCCCTGCGCCAGCGCGCCCTGGAACTGCTCGAACGGGTCGAGATCCCGGCCGCCGCCAGCCGTCTCGACGCCTACC
|
|
| Amino Acid Sequence |
>peptide ABC transporter
MNAMHNAPASDPSLVYPSPLKEFWQAFAHNKGALGGLLFMLLIVFCALFAPWVAPYDPSEQFRDFLLTPPSWLEGGQARFLLGTDELGRDLLSRLIHGAR LSLLIGLSSVVISLIPGILLGLLAGFSPNRAGPLIMRLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPAYVRLTRAAVMTELNRDYVTASRLA GAGTLRLMFVCVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK NAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|