Pseudomonas aeruginosa 3577, AJ64_01822
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3577 adTvG-supercont1.6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGGAAGAGTGACGCCGGCATGCGGTTGCGCCTGATCGCGGTTGGCTCGCGCATGCCTCGCTGGGTCGAGGAAGGCTGGCAGGAATACGTCAAGCGCCT GCCGGCCGAGCTGTCCCTCGAACTGGTGGAGATCCCGCTCAACACCCGCGGCAAGAACGCCGACGTGGCGCGCCTGATCCGTCAGGAAGGCGAGGCCATG CTGGCGCGCGTGCAGCCGGGGGAACGGGTGGTGACCCTGGAGGTCGAAGGTCGGCCCTGGAGCACCGAGCAACTGGCTCGCGAACTGGATCGCTGGCGTC TCGACGCACGCACCGTGAATCTCATGGTCGGCGGCCCGGAAGGGCTGGCGCCGGAGGTCTGCGCGCGCAGCGAGCAGCGCTGGTCGCTGTCGCCGTTGAC GCTGCCGCACCCGTTGGTGCGGATCCTGGTCGGCGAGCAGATCTACCGGGCCTGGACCGTATTGTCCGGGCACCCCTACCACAAATAGTCCCCAGTCCCG
|
|
| DNA Sequence for Gene |
>AJ64_01822
ATGCCGCAGCCGATCCACCTGAAAGACCACGAGAAAGACGCCCGCCTGGTGCGTCGGCGCGTCATCGTCGGGGCGGTGGCGGTGGTCTTGCTGACCCTGG TGCTGGTGGCGCGCATGTACCACCTGCAGGTGACCCAGTACGAGTACCATTCGACGCTGTCGGAGAACAACCGGGTCCATGTGCAGCCGATCCCGCCGAC CCGCGGGATCATCTTCGACCGCAACGGCGTGATCATCGCCGACAACCGGCCGAGCTTCAGCCTGACCATCACCCGCGAACGCACCGAGGACCTGCAGAAG ACCCTCGACACGCTGGTGGAGATCCTCGGCCTGACCGAGGACGACCGGGCCATCTTCGAGAAGCGCATGAAGCAGGGGCGGCGTCCGTTCGAGCCGGTTC CCATCATGTTCGAACTCAACGAGGAACAGATCGCCCGCATCGCGGTGAACCAGTTCCGCCTGCCGGGCGTCGACGTGGCGACCCAGTTCGTCCGCCACTA CCCGCTGAAGGAGCACTTCGCCCATTCGGTCGGGTACGTCGGGCGGATCAACGAGCAGGAACTGAAGAACCTCGACCCGATCAACTACAGCGGCACCCAC CATATCGGCAAGACCGGCATCGAGCGCTTCTACGAGAGCGAGTTGCACGGCACGGTTGGCTACGAGGAAGTCGAGACCAACGCCCGCGGGCGGGTGCTGC GGGTGCTCAAGCGCACCGACCCGATTCCCGGCAAGGACATCGTCCTGAGTATCGACAGCCGCCTGCAGGAGGCCGCCGAGAACGCCCTGGCCGGGCGGCG GGGCGCCATCGTGGCGATCCAGCCGTCCACCGGCGACGTGCTGGCGATGGTCAGCCAGCCGAGCTACGACCCCAACCTGTTCGTCACCGGCATCAGCTTC AAGGCCTATGCCGAGCTGCGCGACTCCATCGACCGGCCGCTGTACAACCGCGTCCTGCGCGGGCTCTATCCGCCGGGCTCGACGGTGAAGCCGGCGGTGG CACTGGCCGGCCTCGACGCCGGGGTGGTCACGCCGACCTCGCGGGTCTTCGACCCCGGCTACTACCAGTTGCCCAACTACGACCACAAGTACCGTAACTG GAACCGCTACGGCGATGGCTGGGTGAGCCTGGAGTCGGCGATCTACCGGTCCAACGACACCTATTTCTACGACCTCGCGCACAAGCTGGGGATCGACCGC CTGCACGCCTTCATGAGCCGCTTCGGCTTCGGCCAGAAAGTCGCCCTGGACATGTTCGGCGAAGCCGACGGGCTGATGCCCTCGCGCGAATGGAAGCGCA AGACCCGCCGCCAGGTCTGGTACCCGGGGGAGACCCTGATCCTCGGCATCGGCCAGGGCTACATGCAGGCGACGCCGATCCAGTTGGCGCAGATGACCGC GCTGCTGGCCAACAAGGGCCACTGGATCCGCCCGCACCTGGCCAAGACCATCGACGGCCAGCCGCCGGTCGACCCCGACCCGATGCCCGACATCGTGCTG CGCGACCCGGCCAACTGGGACCGCGTCGACTACGGCATGCAGCAGGTGGTGCATGGCGCCCGCGGCACGGCGCGCAAGGTCGGCGCCACCTCGGCCTACC TGATCGCCGGCAAGAGCGGTACCGCCCAGGTGGTGGCGATCAAGCAGAACGAGCGCTACGACCGCTCCAAGCTGCTCGAGCGGCACCGCGACCACGCCCT GTTCGTCGGCTTCGCGCCGGCCAACAACCCGCAGATCGCGGTGGCGGTGATGGTGGAGAACGGCGAGTCCGGCTCCGGCGTCGCCGCCCCGGTGGTCAAG CAGGTGATGGACGCCTGGCTGCTCGACGAGCACGGCAAGCTCAAGGCCGAATACGCGGAACCCGTCGCGCCGCTCGCGGCGGCGGTGGCCAAGCCCGAAC CCACGGCAGCCGAGCCGGAGGCGCCCGCCCTTGAACAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTTCGACCGCACCCTGTCCAACGAAGACGTGATGCGCCGGCGCGCCAGCCTGTTGCAGCGCCTGCACATCGACGGGATTCTCCTGCTGCTGTTGCTGATC CTCGGCGCCACCGGCCTGTTCGTCCTCTATTCGGCGAGCGGCAAGAGCTGGGACATGCTGATGAAGCAGGCCACCTCGTTCGGCCTGGGACTGGGCATGA TGGTGGTCATCGCCCAGATCGAGCCGCGCTTCATGGCCCGCTGGGTGCCGCTGGGCTACCTGGTGGGGGTCGCGCTGCTGGTGGTGGTCGACGTGATCGG CCACGACGCCAAGGGGGCGACGCGCTGGATCAACATCCCCGGGGTGATCCGCTTCCAGCCCTCGGAGTTCATGAAGCTGCTGATGCCGATGACGGTGGCC TGGTACCTGTCCAAGCGCAACCTGCCGCCGGGGCTCAAGCACATGGTGATCAGCCTGGCGATCATCATCACCCCGTTCGTGCTGATCCTGAAACAACCCG
|
|
| Amino Acid Sequence |
>penicillin-binding protein 2
MPQPIHLKDHEKDARLVRRRVIVGAVAVVLLTLVLVARMYHLQVTQYEYHSTLSENNRVHVQPIPPTRGIIFDRNGVIIADNRPSFSLTITRERTEDLQK TLDTLVEILGLTEDDRAIFEKRMKQGRRPFEPVPIMFELNEEQIARIAVNQFRLPGVDVATQFVRHYPLKEHFAHSVGYVGRINEQELKNLDPINYSGTH HIGKTGIERFYESELHGTVGYEEVETNARGRVLRVLKRTDPIPGKDIVLSIDSRLQEAAENALAGRRGAIVAIQPSTGDVLAMVSQPSYDPNLFVTGISF KAYAELRDSIDRPLYNRVLRGLYPPGSTVKPAVALAGLDAGVVTPTSRVFDPGYYQLPNYDHKYRNWNRYGDGWVSLESAIYRSNDTYFYDLAHKLGIDR LHAFMSRFGFGQKVALDMFGEADGLMPSREWKRKTRRQVWYPGETLILGIGQGYMQATPIQLAQMTALLANKGHWIRPHLAKTIDGQPPVDPDPMPDIVL RDPANWDRVDYGMQQVVHGARGTARKVGATSAYLIAGKSGTAQVVAIKQNERYDRSKLLERHRDHALFVGFAPANNPQIAVAVMVENGESGSGVAAPVVK QVMDAWLLDEHGKLKAEYAEPVAPLAAAVAKPEPTAAEPEAPALEQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|