Pseudomonas aeruginosa 3577, AJ64_00949
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3577 adTvG-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGAAGACGGCGTGATCCGCCTGCATGGTCGGCGCGAAGGAAGTTGCTGGTGGCTTTGCCTGGAAGACCAGGGCGAGGGTGTGGCCGAGCACCAGTTGGAG ACCATCTTCCGCCCGTTCACCCGGCTGTCTTCGGCACGTACCGGCAAGGGTTTCGGCCTGGGACTGAGCATTGCCCGTCGCGCCGTGGTGCTCCAGGGCG GCCGCCTATGGGCGGAAGCCGCCGATCCGGGGCTGCGCCTGTGCCTGGTGCTGCCTTCTGCCTAGCGAGGCGCAGGTGCCTTTACATTTGGCCTGGATGT AAATGATCTTTACTCTCCTTTGTTAATGATTATCATCCGTGTCGATCTCCTCGGCCGGCCTTGTTCCGGGTCTGCGCCCTGTCCTACCCGTGCCGAGACG TCACCCGCGCAACGCCGGCGACCCAGGCTTCAGAAAAAACGTCAACGTATCCCTCGTGGCTCGCCTGCTACCCGTTTTCCCTCGACAGGAGTAGTCACGC
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| DNA Sequence for Gene |
>AJ64_00949
ATGTACCCCCAATTCCGTCGCGGCCATCTCGCCGCTGCCGTCCTTTTCGCTTCATCGAGCCTGCTGGGCGGGCAGGCCCTGGCCGAGGACGAGCGCCTGG AAGAACTGGACGAACGCGCCGAATCGGTGGTCCAGCTGGGTGACGAGGTGGTGCTGGGCACCGCCGAACAGGAGCTCAAGCAGGCACCGGGGGTATCCAT CATCACCGCCGAGGACATCAGGAAGCGCCCGCCGGTGAACGATCTTTCCGAGATCATCCGCACCATGCCCGGGGTCAACCTCACCGGCAACAGTTCCAGC GGCCAGCGCGGCAACAACCGGCAGATCGACATCCGCGGCATGGGGCCGGAGAACACCCTGATCCTGGTCGACGGCAAGCCGGTCAGCTCGCGCAACTCGG TACGCTACGGCTGGCGCGGCGAACGCGACACCCGCGGCGACAGCAACTGGGTGCCGCCGGAGGAGGTCGAGCGCATCGAGGTCCTCCGTGGGCCCGCGGC GGCACGCTACGGTTCCGGCGCGGCGGGCGGGGTAGTCAACATCATCACCAAGCGCCCGACCGATCGTTTGCGTGGCTCCATGACGGTGTTCACCAACATT CCGGAAAGCTCCAAGGATGGCGCCACGCGCCGCGCCAACTTCAGCCTCAGCGGGCCGCTGACCGAAGCCTTGAGCTTCCGCGCGTACGGCAGCGCGAACA AGACCGATTCGGACGATACCGACATCAACCTCGGACATACCGTCAACCCGAGCCGTACCGTGGCCGGACGCGAAGGGGTACGCAATCGCGATCTCAGCGG GATGCTGTCGTGGCAGGTGACCCCCGACCAGGTCGTCGATTTCGAAGCGGGCTTCAGCCGACAGGGCAACATCTATGCCGGCGATACCCAGAACAACAAC GGCACCGCCAATACCCAGGGACTCGCCGACGACGGTGCGGAGACCAACCGCATGTATCGCGAGAACTACGCCATCACCCACAACGGGACCTGGTCGTTCG GTACTTCCAGGTTCGTCGCCCAGTACGACTCCACCCGCAACAACCGTCTGGAGGAGGGGCTGGCCGGTTCCGTCGAGGGGCAGATCGGCGCCGACCGTTC GTTCAGCACCAGCAAGCTGGAGAACTATCGCCTCAGCGGCGAACTCAACCTTCCGTTGCATGCGTTGTTCGAGCAGGTGCTGACGGTGGGCGCGGAGTGG AACAAGGAAACCCTCAACGACCCGTCCTCGCTCAAGCAGGGCTTCGTGGGAAGCGATAGCTTGCCGGGGACCCCCGCGGCCGGCTCGCGAAGCCCGAAAA GCAAGGCGGAGATCCGCGCGCTGTACGTGGAAGACAATATCGAACTGCGCCCCGGCACCATGCTCACCCCCGGGCTGCGCCTGGACGATCACAGCGACTT CGGCCTGAACTGGAGCCCGAGCCTGAACGCTTCCCAAACGCTCGGCGAATACTTCACGGTCAAGGCCGGTATCGCACGGGCCTTCAAGGCGCCCAACCTG TACCAGAGCAACCCGAACTACCTGCTCTATACCCGTGGCAACGGTTGCCCGATCCAGACCAGCAGCGGCGGCTGCTACCTGGTCGGCAACGAGAACCTGG ACGCCGAGACCAGCGTAAACAAGGAACTGGGCATCGAGTTCCGGCGCGATGGCTGGGTCGCCGGGCTCACCTACTTCCGCAACGACTACAAGAACAAGAT CGTCGCGCCGCTGGATGTCATGGGACAGACCGGGACCGGTAACAACATCCTGCAATGGAGCAACGCGAAGAAAGCAGTGGTCGAGGGCCTGGAAGGCAAC CTGCTGGTCCCCCTGCACGAGGACCTGAGCTGGAGCACCAACCTGACCTATATGCTGCAATCCAAGGACAAGGACACCGGCAACCCGCTTTCGGTGATCC CCGAGTACACCCTGAACTCGACCCTGGACTGGCAGGCCAGCGAGCGTCTTTCCACCCAACTGACCAGCACCATCTACGGCCGCCAGGAGCCGCCGAAGCA TGGCACCAGCCGCAACACGCCGGTGGTCTCGCGAAAAGAGGTGGGTACCTATGGCATCTGGGGCGTCAGCGCCGGCTACACCTTCAGCAAGAACCTGAGC GTACGGGGCGGGGTAAGCAACCTCTTCGACAAGCGCCTGTACCGCCAGGGCAACTCCTTCGACGCCGGCGCGGCAACCTACAACGAGCCGGGTCGCGCCT ACTACGTTTCGATGACCACCTCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCCGCGGCCAACGTGCTTTCACCGGCAGGCGCAACGCCTGTCGGACCTTTCTTTGGCGTTGGTCAGGCATCGGCTGTCCAACGCCAGGTTTTCTCTTC GGACGCCTCTGGTCATCGCATCGCATGCCGTTTCGGGCGGTCTTTCGGCTGAATCGGCATGCATGACCGGATATTGCGGTGCTAGGGTCCGGCCCCAGTT TCCCGGTATCATGCTCAGCCTTTACCGTCAGTGCCGAACGAGTGCCTCCATGACCGTGCAGTACCCGACTATCGCCGACTGCGTTGGCAATACCCCTCTG GTGCGTCTGCAGCGCCTTCCCGGGGAAACCTCCAATACCCTGCTGGTGAAGCTCGAAGGCAACAACCCGGCGGGATCGGTGAAGGACCGCCCGGCCCTGT CGATGATCACCCGTGCCGAACTGCGCGGCGACATCCGCCCCGGCGATACGCTGATCGAGGCTACTTCCGGCAACACCGGCATCGCCCTGGCCATGGCGGC
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| Amino Acid Sequence |
>outer membrane receptor protein
MYPQFRRGHLAAAVLFASSSLLGGQALAEDERLEELDERAESVVQLGDEVVLGTAEQELKQAPGVSIITAEDIRKRPPVNDLSEIIRTMPGVNLTGNSSS GQRGNNRQIDIRGMGPENTLILVDGKPVSSRNSVRYGWRGERDTRGDSNWVPPEEVERIEVLRGPAAARYGSGAAGGVVNIITKRPTDRLRGSMTVFTNI PESSKDGATRRANFSLSGPLTEALSFRAYGSANKTDSDDTDINLGHTVNPSRTVAGREGVRNRDLSGMLSWQVTPDQVVDFEAGFSRQGNIYAGDTQNNN GTANTQGLADDGAETNRMYRENYAITHNGTWSFGTSRFVAQYDSTRNNRLEEGLAGSVEGQIGADRSFSTSKLENYRLSGELNLPLHALFEQVLTVGAEW NKETLNDPSSLKQGFVGSDSLPGTPAAGSRSPKSKAEIRALYVEDNIELRPGTMLTPGLRLDDHSDFGLNWSPSLNASQTLGEYFTVKAGIARAFKAPNL YQSNPNYLLYTRGNGCPIQTSSGGCYLVGNENLDAETSVNKELGIEFRRDGWVAGLTYFRNDYKNKIVAPLDVMGQTGTGNNILQWSNAKKAVVEGLEGN LLVPLHEDLSWSTNLTYMLQSKDKDTGNPLSVIPEYTLNSTLDWQASERLSTQLTSTIYGRQEPPKHGTSRNTPVVSRKEVGTYGIWGVSAGYTFSKNLS VRGGVSNLFDKRLYRQGNSFDAGAATYNEPGRAYYVSMTTSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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