Pseudomonas aeruginosa 3577, AJ64_00623
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3577 adTvG-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCAGATGATCACCTGGCCCAGCCGCGAATCGGCGTACTCCTCCAGCCAGCGGGCCTGGGCGCGCTGGCCGATGTCGACGGGATACAGGCTCGGCTGCG GGTAGCGCTCCTCCAGGTACTGGCAGATCACGCTGGAATCGTTGAGGACGAAGTCACCGTCCACCAGCACCGGAATCTGGCGCAACGGACTGAGGCGCTC GAAGGCCTCGTCGCCGAAGAACGGCACGATGGGGTCGATGCGGTAGGCAATGCCTTTCAGTTCCAGCAGCACCAGCACCTTGCGCACATAGGGGGACAGA TAGGAACCGATGATCAGCAAAGGTTCGGCCACGGCGAGACTCCTGTTCTTGTTATGGGAACACCGATCCTCCGGCAAACCAGCGGGACGACTCAAGTGGC TTCCCGACGGACGCCAATTGCAGGGATAGTCGCACTTTGCGATCATTTGCGAATAATTCTCGTTTTTCCATTCAATCCCGTTTCGGGATGGGGAGCGGTC
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| DNA Sequence for Gene |
>AJ64_00623
GTGTCGGCGGGTGACGTCAGCAACAGCGAATTCGTGGGTAGCCTGTACCGGGACCACCGCGGCTGGCTGCTTGCCTGGCTGAACCGCAACCTCGGCTGCC GCCAGCGCGCCGAAGACCTCAGCCAGGACACCTTCGTTCGCCTCCTCGGCCGCCCGGAGCTGCCCGGCCTGCGCGAACCGCGCGCGTTCCTGGCGAAGGT GGCGCGCGGTCTGATGATCGACCACTTCCGCCGCGCCGCCCTTGAACAGGCCTATCTCGCCGAACTGGCGCTGGTTCCGGAAGCGGAGCAGCCTTCGGCC GAAGAGCAGTACCTGATTCTCGAGGACCTCCGCGAGATCGATCGCCTGCTTGGCACGCTGTCGCTGAAGGCGCGTAGCGCGTTTCTCTATAGCCGCCTGG ACGGCATGCCCCACGCGGAGATCGCCGAGCGTCTCGGAGTCTCGGTGCCGCGCGTGCGCCAATACCTGGCCCAGGGTCTGCGCCAGTGCTACATCGCCCT CTACGGAGAGCCCCGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCCGACGATCGTCATTCGCCGGTACGCGCGCGGGTGCTCGACGAAGCCATCGCCTGGCAATTGCTGCTCGACTCCGGCGAAGCCCATCCCGACGATCA CCGCGCCTTCCACCGCTGGTACGCGGCGCATCCCGAACACGAACGCGCCTGGGAACAGCTCGGCGGCCTCGACCGGCACCTGGCGAGAGCCGCCAACGGG CCGGCACGCAACGCCCTGCTGTCCGGCAACGCACGCTTCAAGCGCCGCCTGCGCCGGCTCGGCGGCAGCGCCCTGGGGCTAGTGCTGGCGCTGGGCGTCG GGCTCGGCGTGGCCAACCGCTACGTCCCGGTCCGCTACCTGCTGGCCGATGCCTACAGCGCCACCGGCGAGCAGCGCGAGCTGACCCTCCCGGATGCCAC CCATGTGCGCCTGAACAGCCGCAGCGCCATCGACGTCCGCTTCGACGGCGAACGCCGCCAGGTCGTGCTACTGGCCGGCGAGATCCTGGTGGAAACCGCC
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| Amino Acid Sequence |
>RNA polymerase sigma factor
MSAGDVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREPRAFLAKVARGLMIDHFRRAALEQAYLAELALVPEAEQPSA EEQYLILEDLREIDRLLGTLSLKARSAFLYSRLDGMPHAEIAERLGVSVPRVRQYLAQGLRQCYIALYGEPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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