Pseudomonas aeruginosa 3576, AJ63_05545
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3576 adVri-supercont1.37, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCCCCAACCTCTCCGATAACTCACTTTCCTTCACCCTGGGCCGATGGAACGAAACCGTGCGGCGCTCCACCATTGAAAGCGACCAACCAACCATCGC TATCCGCAGGTACGTGTCGTCTCGTATTTGCCCAGCAAACTTCGCTCGGGTGATCTGTGTGGCCGGGGGACCTGTGCTGCGTCGTGTGATAGTGCGCGCC CCATCTTCGGCTGCCTTGCCAATGAAGAACTGTGCAACTTTTTGGTTGATAACGTTGTGGATAGAACGCTAGGGAACAAATACCCAAAGGGTTCCGAGAG AATGCGCAACTTTTTGCAAGCGGTGTGCAAAAAGTTGCGCAATTTTCAGTGTTCTTCCCATGAGAATCGCCAGAGAATTTTTGGTTTCCTCCAATAACGC CTTGATGGAAAAGAGTTTCAAGACCAGTGGCACAGTTCTTGTCTAGCACTGGTGCCCCCGGCATGTCGCCTGGGCACTTTCAAAGACAAGGAACGTATCC
|
|
| DNA Sequence for Gene |
>AJ63_05545
ATGGCAACCCCCGCCTACATGTCCATCACCGGCACCAAGCAGGGCCTGATCACCGCCGGCGCCTTCACCGAGGATTCGGTCGGCAACACCTACCAGGAAG GCCACGAGGACCAGGTGATGGTCCAGGGCTTCAACCACGAAGTGATCATCCCGCGCGACCCGCAGTCCGGCCAGCCGACCGGCCAGCGCGTGCACAAGCC GGTGGTCATCACCAAGGTCTTCGACAAGGCCTCGCC
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
C
|
|
| Amino Acid Sequence |
>secreted protein Hcp
MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|