Pseudomonas aeruginosa 3576, AJ63_05420
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3576 adVri-supercont1.35, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCCTGCGAAGTGTCCTATAAGGATCGCGGCGGCAAATACCAGGGCCAGCGCGGCGTGACCCTGCCAAAAGCCTGACGCCAGAGCGTTTCGACACCGGA AACCGGGCCTGGCGCCCGGTTTTTTCATGCCTTTTCCGCCAACCCCTCGCTGTCCCCCGCCGGCCGCTCTGGCACGCCTTATCGCGGGCTGGCAGGGGCT TATGCGCAGGCGATCCCCCGTCCTGTGAAATCTGGCAGTTACCGTTAGCTTTCGAATTGGCTAAAAAGTGTTCATCGGCTACGCGTGAACACGGACGCCA ATCGTTTGCGCAGGCCGATCTGCAAGACCCACACAAGCCCCTCGCCTGAAGGGGTACGCATCCGCCGTGGCTGGTCCGCGCGGATGGCCGCTGAGTTACT TGTCTGCCGTTCGAACAACAAGAACGAACTCTACGTAATGCCGGGATACCCGTGGCAGCGATAGCTGTTTGCCTGTTCGAAAATTTTTGGGAGGTGTGAA
|
|
| DNA Sequence for Gene |
>AJ63_05420
ATGCGGCGCGAAAGTCTGTTGGTATCGGTTTGCAAGGGCCTGCGGGTACATGTCGAGCGCGTTGGGCAGGATCCCGGGCGCAGCACGGTGATGCTGGTCA ACGGCGCGATGGCGACCACCGCCTCGTTCGCCCGGACCTGCAAGTGCCTGGCCGAACATTTCAACGTGGTGCTGTTCGACCTGCCCTTCGCCGGGCAGTC GCGTCAGCACAACCCGCAGCGCGGGTTGATCACCAAGGACGACGAGGTGGAAATCCTCCTGGCGCTGATCGAGCGCTTCGAGGTCAATCACCTGGTCTCC GCGTCCTGGGGCGGTATCTCCACGCTGCTGGCGCTGTCGCGCAATCCGCGCGGTATCCGCAGCTCGGTGGTGATGGCATTCGCCCCTGGACTGAACCAGG CGATGCTCGACTACGTCGGGCGGGCGCAGGCGCTGATCGAGCTGGACGACAAGTCGGCGATCGGCCATCTGCTCAACGAGACCGTCGGCAAATACCTGCC GCCGCGCCTGAAAGCCAGCAACCATCAGCACATGGCTTCGCTGGCCACCGGCGAATACGAGCAGGCGCGCTTTCACATCGACCAGGTGCTGGCGCTCAAC GATCGGGGCTACCTGGCTTGCCTGGAGCGGATCCAGAGCCACGTGCATTTCATCAACGGCAGCTGGGACGAATACACCACCGCCGAGGACGCCCGCCAGT TCCGCGACTACCTGCCGCACTGCAGTTTCTCGCGGGTGGAGGGCACCGGGCATTTCCTCGACCTGGAGTCCAAGCTGGCCGCGGTACGCGTGCACCGCGC CCTGCTCGAGCACCTGCTGAAGCAACCGGAGCCGCAGCGGGCGGAACGCGCGGCGGGATTCCACGAGATGGCCATCGGCTACGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACCCTTGACCTGCGAAGACCCGGCCTGGCCGGGCTTTGCGGTTGCATAACGCACGGAGTAGCCCCATGCACGCCATCCTCATCGCCATCGGCTCGGCCGG CGACGTATTTCCCTTCATCGGCCTGGCCCGGACCCTGAAATTGCGCGGGCACCGCGTGAGCCTCTGCACCATCCCGGTGTTTCGCGACGCGGTGGAGCAG CACGGCATCGCGTTCGTCCCGCTGAGCGACGAACTGACCTACCGCCGGACCATGGGCGATCCGCGCCTGTGGGACCCCAAGACGTCCTTCGGCGTGCTCT GGCAAGCCATCGCCGGGATGATCGAGCCGGTCTACGAGTACGTCTCGGCGCAGCGCCATGACGACATCGTGGTGGTCGGCTCGCTCTGGGCGCTGGGCGC ACGCATCGCTCACGAGAAGTACGGGATTCCCTACCTGTCCGCGCAGGTCTCGCCATCGACCTTGCTGTCGGCGCACCTGCCGCCGGTACACCCCAAGTTC
|
|
| Amino Acid Sequence |
>rhamnosyltransferase
MRRESLLVSVCKGLRVHVERVGQDPGRSTVMLVNGAMATTASFARTCKCLAEHFNVVLFDLPFAGQSRQHNPQRGLITKDDEVEILLALIERFEVNHLVS ASWGGISTLLALSRNPRGIRSSVVMAFAPGLNQAMLDYVGRAQALIELDDKSAIGHLLNETVGKYLPPRLKASNHQHMASLATGEYEQARFHIDQVLALN DRGYLACLERIQSHVHFINGSWDEYTTAEDARQFRDYLPHCSFSRVEGTGHFLDLESKLAAVRVHRALLEHLLKQPEPQRAERAAGFHEMAIGYA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|