Pseudomonas aeruginosa 3576, AJ63_05318 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3576 adVri-supercont1.33, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAACGTCGCTCCACGGAGTCAAGATCCCGGCGCGATGGTCGCCGCGGTTCGCGTCGCGTTGTCCCGCGCAATCGTGCAAAGCATTGTCGGGCTTGAGC CGGAGCTGCCTGTGATCACGCTCGAGCCGAGGTTGGAACAGATTTTGCTGAACAGCATGCAGAAGGCCGGACAAGGCTCCGAGGACGGCATGTTGCTGGA GCCGGGGATGGCCGAGAAGCTGCAACGCTCGCTGATCGAGAGCGCGCAACGCCAGGAGATGCTCGGTAAGCCGGCGATCCTGCTGGTTGCCGGACCGATC CGCTCGATGATGTCGCGCTTCGCGCGGATGGCGGTGCCCAGCATGCATGTGCTGGCCTACCAGGAAATCCCGGACAACAAGCAAGTCACCATCGTCGCGA CGGTGGGACAGAACTGAACGAGGGCTGCGCCGGCTCCAGGGCCGGCACACCGGGCAACCTGAGGTTGCCGGCAAGACTACTGAACTGAGGGGTTCGGGCA
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| DNA Sequence for Gene |
>AJ63_05318
|flhF
ATGCAAGTCAAACGCTTCTTCGCCGCCGATATGCGCCAGGCCATGAAACTGGTCCGCGACGAACTGGGTCCGGACGCCGCGATTCTCGGCAACCGCCGGG TCGCCGGCGGCATCGAGCTGACCGCGGCGCTGGATTACCAGGCCCCGCCGGCGCCGAGCAAGCCCAACCCGGCGCTGGAAGTGGAGCTGCGCAAGACCCA GGCGCGGATCGCTGAGGCGCGCGCCGAGTTGACGGCGCGTCCGGCGGAAAACCAGCGCAAGGACCGTCAATTGTTCGCCGAGGAGAAGCCGGCGCGTCCG ACCCTGGCCGAGTCCATGACGGCGGCGCAGGCCAAGCCCCAGGCGGGCGGCCAGACCCTCGAGGCAATGCGTTTCGAACTGAACGGCCTGCGCGAGCTGA TCGAGGTACAACTGGGTTCCATCGCCTGGGGCCAGTTGCAGCACCAGCGTCCGCAGCAGGCCAATCTCTGGCGGCGCCTGCAGCGCATGGGCTTGCCGGC GGAGCTGAGCAAGCCGTTGCTGGAGCGGGTCGCCGCGGTGGGCGATACGCGCCAGGCCTGGCGCATGCTGTTGGCGCACCTGTCGCGTGCCGTGCAGACC CCCGAGCAGGACCCGCTCGACGCGGGCGGCGTACTGGCCCTGGTCGGCCCGGCAGGTGCCGGCAAGACCACCACCCTGGCGAAGATGGCCGCGCGCTACG TCCTCAAGTACGGCGCCCAGAGCCTGGCGCTGGTGAGCATGGACAGCTACCGGATCGGCGCCCAGGAGCAGATCAAGACCCTCGGTCGGATCCTCAACGT ACCGGTGACCCTGGTCGATCCCGGCCAGTCGCTGATCCAGGCCCTGGCGCCGCTGGCGCGCAAGCGCATGGTGCTGATCGATACCGCCGGCCTGCCGGCC AGCGACCCGGCATTGCGCATGCAGCTCGAGGCACTGGCGTCGCCGAGCCTGAACGTGAAGAATTACCTGGTGATGGCCACCACCAGCCAGAGCCAGGTGC TCAAGTCGGCCTACCAGACCTATCGGCACTGCGGGCTGGCGGGTTGCATCCTGACTAAGCTGGACGAGGCGGGCAGCCTCGGTGAATCGATGGCGCTGGC TATCGCCCAGCGTCTCCCGGTAGCCTATCTGGCGGATGGGCCGCGGATTCCGGACGACCTGCAGGTGGCGCGCAGTCACCAACTGGTCAGCCGGGCGGTG AGCCTGCAGGCACCGGAAGAGCCCAGCGAGGACGCCATGGCCGAGATGTTCGCCGGGCTCTACCAGCAACCGGCGCGGCGTGCCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGACGTGGGAAGAACCGCGCGTGGCGCGGGTGACGGAAGCGAAGGTGGCTTCCGCCGGGCCGGGAGCGATGGCGCATCGTTCCCGCCAATACCGGAGAGC GCTGGAAGGGGCGTTCCGGGAAGACGACAACACAAGGTATGAAGCAGATGGGTAGCATGCATCCCGTACAGGTGATCGCAGTAACTGGCGGCAAGGGCGG CGTCGGCAAGACCAATGTGTCGGTGAACCTGGCACTGGCTCTGGCCGATCTCGGCCGTCGCGTCATGCTGCTGGATGCCGACCTCGGCCTGGCCAACGTC GACGTCCTGCTGGGACTCACGCCCAAGCGCACCCTGGCCGACGTGATCGAGGGACGCTGCGAACTGCGCGATGTCCTCCTCCTCGGTCCCGGTGGCGTGC GCATCGTTCCCGCGGCCTCCGGCACGCAGAGCATGGTGCACCTCTCGCCGATGCAGCATGCGGGGCTGATCCAGGCGTTCAGCGATATCAGCGACAACCT
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGPDAAILGNRRVAGGIELTAALDYQAPPAPSKPNPALEVELRKTQARIAEARAELTARPAENQRKDRQLFAEEKPARP TLAESMTAAQAKPQAGGQTLEAMRFELNGLRELIEVQLGSIAWGQLQHQRPQQANLWRRLQRMGLPAELSKPLLERVAAVGDTRQAWRMLLAHLSRAVQT PEQDPLDAGGVLALVGPAGAGKTTTLAKMAARYVLKYGAQSLALVSMDSYRIGAQEQIKTLGRILNVPVTLVDPGQSLIQALAPLARKRMVLIDTAGLPA SDPALRMQLEALASPSLNVKNYLVMATTSQSQVLKSAYQTYRHCGLAGCILTKLDEAGSLGESMALAIAQRLPVAYLADGPRIPDDLQVARSHQLVSRAV SLQAPEEPSEDAMAEMFAGLYQQPARRAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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