Pseudomonas aeruginosa 3576, AJ63_04743

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa 3576 adVri-supercont1.26, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCACCAGGCGGTGGACCACCTGCTGCTCACCGGGTGCGGCAGGCGTACCGACGTACGCTGGCAGGGCGGGCTGGCCGCGCACGTGCGGCGGCGCCTGGCC GACTACATCGAAAGCCACCTGGAGCAGCCGCTGGAACTGGGGTCGCTGGCGGAGCTGGCGGCGCTCTCCGAGTACCACTTCGCGCGCATGTTCCGCGTCT CCTTCGGCCTGCCGCCGCACCGCTACGTGCTGGAACGACGCCTGGCGCGGGCCCGCGACCTGCTGGCGTACTCCGCGCAGTCGCTCCAGGAGGTCTCGCT GGCCTGCGGCTTCGCCAGTCCGAGCCATTTCAACCGGCGCTTCCGCGAAGCCCATGGCGCCACCCCGGGGCAGTACCGCGCCGCCCTGAAAGCCTCCTGA AAGCCAGGCGCCGACAGCCTGCGGTTGTAGGCAGGCATTCCCGCAGCATAAAATGATAACTATTATCATTCGTTAATCCTTCTGCTCCGGGAATGTCCAG
DNA Sequence for Gene
>AJ63_04743
GTGTCGAGCGCCGACCTCGCCCACGCGGCCGCGTTGCATACCCTCTACAGCGACCACCACCACTGGCTCACGGGCTGGCTGCGGCGCCGCCTCGGCTGCC CGCAGAACGCCGCCGACCTGGCCCAGGACACCTTCGTCAAGGTCCTGGTTTCGCGCCAGGCCGCGCGCATCGACGAACCGCGCGCCTTCCTCACCACCAT CGCCCGCCGCGTGCTGTGCAACCACTACCGCCGCCAGGACGTCGAGCGCGCCTACCTGGAAGCCCTGGCCAGCCTGCCCGAGCGGGAAGTCCCCAGCGAA GAGACCCGCGCCATCGTCCTGGAGACCCTGGTCGAGCTGGACCGCCTGCTCGACGGCCTGCCGCCGCTGGCCAAGGAGACCTTCCTGCTGGCCCAGCTCG ACGGCCTGGGCTACGCCGAGATCGCCACGCAGCTGGGCATCTCCCTGAGCAGCGTCAAGCGCTACATGCTCAAGGCTGCGCAACGCTGCTACTTCGCCGA GCTGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGCCCGCCGCACCCAAGGTGCCGCCGCAGGTGGCCGAACAGGCCGTGCGCTGGCTGGTCGAGCTGCAGGGCGGCGCCGACGACGAACGCCTGCGCCA GGCCTGGCAGCGCTGGCGCCAGGCGGCCCCGGAACACGAGCAGGCCTGGCGCCACATCGAGGCGGTCAACCAGCGCCTGGCCGGGATAGGCACGCCACTG GCCCTGGCCGCCATCAACGCACCGCATTCGCCGCAACGCCGGCGCGCGCTGAAGACCCTGCTGCTGGTCCTGGCCGCCGGCGGCAGCGCCTGGGGCCTGC GCGAGAGCGGCAGCCTGCAGCGCTGGAGCGCCGACTATGCCACCGGCGTCGGCGAACGCCGGCGCCTGGCCCTGGCCGACGGCAGTCGCCTCGAGCTGAA CAGCGACACGGCGGTGGATGTACGCTTCGATGCCGGCGAACGGCGCCTGCTCCTGCTGCGCGGGGAAATCCAGCTCAGCACCGGCCAGGACCCGCGCCCG
Amino Acid Sequence
>RNA polymerase sigma factor
MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDTFVKVLVSRQAARIDEPRAFLTTIARRVLCNHYRRQDVERAYLEALASLPEREVPSE ETRAIVLETLVELDRLLDGLPPLAKETFLLAQLDGLGYAEIATQLGISLSSVKRYMLKAAQRCYFAELP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site