Pseudomonas aeruginosa 3576, AJ63_04608
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3576 adVri-supercont1.24, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTCCTTTTAAAACACGGGAAGCGATTCCCGGCCTGTTCACTCAGAGGAAGCCCATCATGGCACTGAGCGTTGAAGAAAAAGCGCAGATCGTTAACGAAT ACAAGCAAGCTGAAGGCGACACCGGTTCCCCGGAAGTGCAGGTAGCCCTGCTGTCCGCCAACATCAACAAGCTGCAGGATCACTTCAAGGCCAACGGCAA GGATCACCATTCCCGCCGTGGTCTGATCCGTATGGTTAACCAGCGCCGTAAGCTGCTGGACTACCTGAAGGGCAAAGACGTGTCTCGCTACACTGCCCTG ATCGGCCGTCTGGGTCTGCGTCGCTAAGCGACGCCGGTCGGCAGCTTGAAGCAAGGAGCTGGAAGTCTGGCGTCGATACCCGCACACGAGGCGGGTATCG GCGTCGGGCTTCCAGCTTCGCGCTTTCTAGGAATCGATTCGGGTCCGACTCCCGGCATTCCACCGATTTCCCCCAAGGCAACATAGAAGGTAAAGACACC
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| DNA Sequence for Gene |
>AJ63_04608
GTGAACCCGGTAACCAAGCAATTCCAGTTCGGTCAGTCGACCGTCACTCTCGAGACCGGCCGTATCGCTCGCCAGGCCACCGGCGCCGTACTGGTCACCA TGGACGACGTCAGCGTGCTGGTCACCGTGGTCGGCGCCAAGTCGCCGGCCGAAGGCCGCGACTTCTTCCCGCTGTCCGTGCACTACCAGGAAAAGACCTA CGCCGCAGGCCGTATCCCCGGCGGTTTCTTCAAGCGTGAAGGACGTCCTTCCGAGAAGGAAACCCTGACCTCGCGCCTGATCGACCGTCCGATCCGTCCG CTGTTCCCCGAAGGTTTCATGAATGAAGTGCAGGTCGTCTGCACCGTCGTTTCCACCAACAAGAAGTCCGATCCGGACATCGCCGCGATGATCGGTACCT CCGCCGCCCTGGCGATCTCCGGCATTCCGTTCGCCGGCCCGATCGGCGCCGCCCGCGTCGGTTTCCACCCGGAAATCGGCTACATCCTCAACCCCACCTA CGAGCAACTGCAGAGTTCCAGCCTCGACATGGTCGTGGCCGGTACCGAAGACGCCGTGCTGATGGTGGAGTCCGAGGCCGACGAACTGACCGAAGACCAG ATGCTCGGTGCCGTGCTGTTCGCCCACGACGAGTTCCAGGCGGTGATCCGTGCCGTCAAGGAGCTGGCCGCCGAAGCTGGCAAGCCGGCCTGGGACTGGA AAGCCCCGGCGGAAAACACCGTGCTGGTCAACGCCATCAAGGCAGAGCTGGGCGAAGCGATCTCCCAGGCCTATACCATCACCATCAAGCAGGACCGCTA CAACCGTCTGGGCGAGCTGCGCGACCAGGCCGTGGCCCTGTTCGCCGGCGAGGAAGAGGGCAAGTTCCCGGCTTCCGAGGTCAAGGACGTATTCGGCCTG CTGGAATACCGCACCGTTCGCGAGAACATCGTCAACGGCAAGCCGCGTATCGACGGTCGTGACACCCGTACCGTGCGTCCGCTGCGCATCGAAGTCGGCG TGCTCGGCAAGACCCACGGTTCCGCGCTGTTCACCCGTGGCGAAACCCAGGCCCTGGTCGTCGCGACCCTCGGCACCGCGCGTGATGCCCAGCTGCTGGA TACCCTGGAAGGCGAGCGCAAGGACGCCTTCATGCTGCACTACAACTTCCCGCCGTTCTCGGTAGGCGAGTGCGGCCGCATGGGCAGCCCGGGTCGTCGT GAAATCGGCCATGGCCGTCTGGCCCGTCGTGGCGTCGCCGCCATGCTGCCGACCCAGGACGAGTTCCCCTACACCATTCGCGTGGTTTCCGAGATCACCG AGTCCAACGGTTCCAGCTCGATGGCCTCCGTGTGCGGCGCCTCCCTGGCGCTGATGGATGCCGGTGTGCCGGTCAAGGCGCCGGTCGCCGGTATCGCCAT GGGCCTGGTCAAGGAAGGCGAGAAGTTCGCCGTCCTGACCGACATCCTCGGTGACGAAGACCATCTGGGCGACATGGACTTCAAGGTTGCCGGTACCGAC AAGGGCGTCACCGCCCTGCAGATGGACATCAAGATCAACGGTATCACCGAAGAGATCATGGAGATCGCCCTGGGCCAGGCCCTGGAAGCTCGCCTGAACA TCCTCGGCCAGATGAACCAGGTCATCGCCAAGCCTCGCGCCGAGCTGTCCGAGAACGCCCCGACCATGCTGCAGATGAAGATCGACTCGGACAAGATCCG CGACGTCATCGGCAAGGGCGGCGCGACCATCCGTGGTATCTGCGAAGAGACCAAGGCCTCGATCGACATCGAGGACGATGGCAGCGTGAAGATCTACGGC GAAACCAAGGAAGCCGCCGAGGCCGCCAAGCTGCGCGTCCTGGCGATCACCGCGGAAGCCGAGATCGGCAAGATCTACGTCGGCAAGGTGGAGCGCATCG TCGACTTCGGTGCCTTCGTCAACATCCTGCCGGGCAAGGACGGCCTGGTGCATATCTCGCAGATCAGCGACAAGCGCATCGACAAGGTCACCGACGTGCT GCAGGAAGGCCAGGAAGTGAAGGTCCTGGTGCTCGACGTGGACAACCGTGGCCGCATCAAGCTGTCGATCAAGGACGTGGCTGCCGCCGAAGCTTCCGGC GTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGAGTCGTGATCGATGAAAACAGGGCCCTCGGGCCCTGTTTTCGTTTCCGCGACACGCTTCTCGGCGAAGGGGGTGAATCCTTGCATTTTGCAAGCCC TGCCATCGCCAATTCGGCATTCTGCAACCGTCTCGCTTCCGATCTGTTTTTTAACCTATTGTTTTTAAAGGATTTTATTTTAGAGGAAAACTGGCACAGC GCTTGCGATATCTACTATGCAACTGACGCCAGGAATGGCTGCAGTTTTTCGAAATCCATAGGAGAAACCGCAATGAAATTCAGCAAACTCGCTATTGCCG CTGCTACTGCCACTGCTCTGAGCTTCTCGATGGCCAATGCGTTCGCTGCCCAGCCCATCAGCCTGGCGGCCAACGACACTATGCAGAAAACCGAAGAAGC GGTTTCCGATACCTGGATCACCAGCAAGGTGAAATCAAGCCTGATCGCCAACAAGAATGTCAGTGGCGTCGATATCAAGGTCGAGACCAACAAAGGTGTG
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| Amino Acid Sequence |
>polynucleotide phosphorylase/polyadenylase
MNPVTKQFQFGQSTVTLETGRIARQATGAVLVTMDDVSVLVTVVGAKSPAEGRDFFPLSVHYQEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRP LFPEGFMNEVQVVCTVVSTNKKSDPDIAAMIGTSAALAISGIPFAGPIGAARVGFHPEIGYILNPTYEQLQSSSLDMVVAGTEDAVLMVESEADELTEDQ MLGAVLFAHDEFQAVIRAVKELAAEAGKPAWDWKAPAENTVLVNAIKAELGEAISQAYTITIKQDRYNRLGELRDQAVALFAGEEEGKFPASEVKDVFGL LEYRTVRENIVNGKPRIDGRDTRTVRPLRIEVGVLGKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGERKDAFMLHYNFPPFSVGECGRMGSPGRR EIGHGRLARRGVAAMLPTQDEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPVKAPVAGIAMGLVKEGEKFAVLTDILGDEDHLGDMDFKVAGTD KGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQVIAKPRAELSENAPTMLQMKIDSDKIRDVIGKGGATIRGICEETKASIDIEDDGSVKIYG ETKEAAEAAKLRVLAITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISQISDKRIDKVTDVLQEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASG V
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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