Pseudomonas aeruginosa 3576, AJ63_04099
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3576 adVri-supercont1.19, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGCGGTGAGCGCCGGCACCGGTGCGGGCGCCGCCGAGGAAGTGCTGGGCGCCGGCCAGCAGGTCGGCTTCGCCGACGGCAAGCTGGGCCGGCCCGTGGC CATCGACGCCGCCGCCGCGCTGGCCTGGCGCCAGGGTTGGCTGAGCTTCTACCGGCGGCCGCTGGCAGAAGTGCTCGACGAACTCGCTCGCTACTACCCC GGACGCATTCTCCTGCTCGACGACGCGCTCGGTCGCCAGCCGGTCAGCGGCAGCTTCCGCAGCGATGATCCCGAAGCCGCGCTGAAGTCGCTGCAGGCGG TGCTCGGCTATCGCCAGCAGATCCTGTTCGGACGCCTGGTGGTGATTCGCTGACGGTGGCCCTGGTCCGTTTGGCCGCAGGAATCTTTCCCGGCGAAGAA TTTTTTTGCCCTGCGGGGTGAGGTAAATCCGGCGCCGCTTCGTGTAGTGCTCATGACCGCGATTGATTCGCATTAGAAAAGCGACCGACACGAGCAACCC
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| DNA Sequence for Gene |
>AJ63_04099
ATGACCCCGTTCCCGCGCTTCGCCCTGCGTACTCTCCCCGCCCTGTTCCTCAGCCTCGGCTGTCTCGCCGCCACCGTGCAGGCCGCCGAGGCGGTTCGCT ACCGCTTCAGCCAGGCTGCCGCGCCGCTGGCCCAGGCGCTCAACGCGTTCAGCCGGGCCAGCGGGCAGACGCTGCTCTACACCGCCGAGCTGCCGCCGCA GGCGACCGCTCCGGCATTGCACGGTTCGCTGGACGCGGAGGAGGCGCTGCAACGCCTGCTGCAGGGCAGCGGCCTGCGCGCGCGGCGGATCGACGAGCGC ACCCTGACCCTGGAACCGATCCCCGCCAGCGGCGCGCTCGACCTCGATGCCACGACGGTCTCCGCCGCCGCCCCGGCGCAGGGCTACCGTCCGGCGGCCA ACGCCTCGATCAGCCGCGGCGATGCGCCGCTACTGGAAATCCCCCAGGCGATCAGCGTGGTCCCGGCACAGGCGCTGCAGGACCAGCGCCCGCGCAACCT TGACGACGCGCTGGGCAACATCAGCGGCATCACCCAGGCCAACACCCTCGGCGGTACCCAGGACGCGGTGATGAAGCGCGGCTTCGGCGACAACCGCGAC GGCTCGATCATGCGCGACGGCATGCCCTCGGTGCAGGGCCGCAATTTCACCGCCACCGCCGACCACGTCGAGGTGCTGAAGGGGCCAGCATCCCTGCTCT ATGGCATCCAGGACCCGGGCGGGGTGGTCAACGTGGTGAGCAAGAAGCCACAACTGCAACAAGCCAACGCCCTGACCCTGCGTGGCTCGGCCTACGCCCA CGGGCGCAACGGCAGCGGCGGCCAGCTCGACTCCACTGGCCCGCTGGGCGACAGCGGACTGGCCTACCGGATGATCCTCGATCATGAGGACGAGGATTAC TGGCGCGACTTCGGCAAGAGCCGCGAGACGCTGGTGGCGCCCTCGCTGGCCTGGTACGGCGAGGACACGACGGTCAACCTGAGCTACGAGCACCGCGAGT TCACCACGCCGTTCGACCGTGGCACGGCCATCGACCCGCGCACCAACCGCCCGCTGGACATCCCGCGCAGCCGGCGCCTGGACGAGCCCTTCAACATCAC CGAGGGCCGTTCCGAGCTGACCCGCCTGGACCTCGAACGGCAGCTCGACGACACCTGGAAGGCCCACTTCGGCTACGGCTACAGTCGCGAGACCTACGAC GACAACCAGGCCCGGGTGATGGCCGTGAACGCCGACGGCACCCTGACCCGGCGCATGGACGGCACCCACGGCGCGGTCAGCAGCGACAGCTTCGCCACCC TCGGCCTGAGCGGAACGCTGCAACTGGCCGGGATGCAACATGACCTGCAATTCGGCATGGACCACGAGAAGCGCAAGATCTTCCGCGCCGACCTGCTGCG CGACAGCAAGACCAGCCGCTTCGACTACCTCGACCCGGTCTATGGCCAGGTGGTGCCGTCGACCCGGGTGGTCGCCGGCGACAGCGACCAGACCGACAAG CTGCGCAGCGACTCGTTGTACTTCCAGGACTCGATCCACCTGGACGAACGCTGGATCCTGGTCGGCGGCGCGCGTTACCAGATCTACGACCAGCTCGCCG GGCGCGGCCGGCCGTTCAACGCCAACACCGACATCAACGGGCAGAAATGGGTGCCGCGCGGCGGCCTGGTCTACCGCCTGAGCGACGAGGTTTCGCTGTA CGGCAGCTACACGCGCTCGTTCAAGCCGAACTCGACCATCGCCCCGCTGAGCACCGGCGAGACCATCGATTCGGCGATCCTGCCGGAGCAGGCGACCTCC TGGGAGCTGGGCGCCAAGCTGGATCTGCCGGGGCGTCTCAGCGGCACCCTGGCGCTGTTCGACATTCGCAAGAAGAACGTGCTGGTCAACGAACTCGACG GTGCTGGCAACAGCAGCGTGCGCGCCGCCGGCCGGGTCCGCTCGCGCGGCCTGGAGCTGGACCTCACCGGCCAGCTCAGCGAACGCTGGAGCCTGATCGG CAGCTACGCCTGGCTCGCCGCGGAAGTCACCGAGGACCCGACCCTGGAGGGCAAGCGCCTGCAGAACGTGGCGCGCAACACCGCGTCGCTGTCGGCGGTC TACGAACTCGGCCAGCTCTTCGGCGGCGACCGCCTGCGCCTGGGCGGCGGCGCGCGCTACGTCGGCAAGCGCCCGGGCGACCCGGCCAATTCCTTCGACC TGCCGTCCTACACCGTGGCCGATGCCTTTGCCAGCTACGACACCCGCTTTGGCGGACACGGCGTGAAGTTCCAGCTCAACGTGAAGAACCTGTTCGACCG CACCTACTACCCGTCCAGTGCCAATCGACTGTACGTGGCGATGGGCGAGCCCCGGCAGTTCCAGCTGTCGACGACGGTGGAGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGGCGCTCGCTCCAGGTGGGGTTCCCCGGCGTCCTCCTGGACGTGGAGGCCCCCCTGAAGGGCGAAGGGTCGGCGCGATGCTGCCCGACCATGCTCCA TCTGGTTCCTTCTTCCCCCAGGGAAGGGATTGCCCGGCGCGTGAGTCGTTCCGCCATCCAGTGCCTTCTCCCTTTGGGGAAAGGAAGGCGGAGAACCGCC TGGCACGACCTCGCCGCACGCCACACCTCGTTCCCAACCCGCCCGTTGGGTACCATGCCCGCACCACTCGCCGCCACGGCCGCCCCATGAACCTCGACAA CCGCATCAAGTTCCGCCACCTCGCCTGCTTCCTCGAAGTCGCCCGCCAGCGCAGCTTCGCCAAGGCGGCGGATGCCGTGGCGGTGTCGCAGCCGGCGATC TCCAAGACCCTCAAGGAACTGGAGGAAATCCTCGGCGCGCGCCTGTTCGAACGGAGCAAGGCCGGCGCCGAGCTGACCGAGGCGGGCGTGACCTTCCTGC
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| Amino Acid Sequence |
>TonB-dependent receptor
MTPFPRFALRTLPALFLSLGCLAATVQAAEAVRYRFSQAAAPLAQALNAFSRASGQTLLYTAELPPQATAPALHGSLDAEEALQRLLQGSGLRARRIDER TLTLEPIPASGALDLDATTVSAAAPAQGYRPAANASISRGDAPLLEIPQAISVVPAQALQDQRPRNLDDALGNISGITQANTLGGTQDAVMKRGFGDNRD GSIMRDGMPSVQGRNFTATADHVEVLKGPASLLYGIQDPGGVVNVVSKKPQLQQANALTLRGSAYAHGRNGSGGQLDSTGPLGDSGLAYRMILDHEDEDY WRDFGKSRETLVAPSLAWYGEDTTVNLSYEHREFTTPFDRGTAIDPRTNRPLDIPRSRRLDEPFNITEGRSELTRLDLERQLDDTWKAHFGYGYSRETYD DNQARVMAVNADGTLTRRMDGTHGAVSSDSFATLGLSGTLQLAGMQHDLQFGMDHEKRKIFRADLLRDSKTSRFDYLDPVYGQVVPSTRVVAGDSDQTDK LRSDSLYFQDSIHLDERWILVGGARYQIYDQLAGRGRPFNANTDINGQKWVPRGGLVYRLSDEVSLYGSYTRSFKPNSTIAPLSTGETIDSAILPEQATS WELGAKLDLPGRLSGTLALFDIRKKNVLVNELDGAGNSSVRAAGRVRSRGLELDLTGQLSERWSLIGSYAWLAAEVTEDPTLEGKRLQNVARNTASLSAV YELGQLFGGDRLRLGGGARYVGKRPGDPANSFDLPSYTVADAFASYDTRFGGHGVKFQLNVKNLFDRTYYPSSANRLYVAMGEPRQFQLSTTVEF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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