Pseudomonas aeruginosa 3576, AJ63_01770
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3576 adVri-supercont1.5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGCGTGTTTTATTGGAGCGCATGGCTGGCGCGCCGCTGGCCGAGCTGATCGTCGGGGTCAAGCGCGAGGAGGGCTTCGGCCTGGCATTGGTGATCGGTG CCGGCGGGATACTCGTGGAGCTGCTGCGCGACAGTCGCAGCCTGCTCCTGCCAACCACCGACGCGGCGATCCGCGATGCCCTGCTGAGCCTGCGCAGCGC GCCGTTGCTCAGCGGCTTCCGCGGTCGCCCGGCAGTGTGCATGGAGGCCCTGGTGGCGGCGATCCGCGCGGTCGCCGAATTCGCCTGCGAACATGCCGAG CGCTTGCTGGAGCTGGACGTCAATCCGTTGCTGGCGGATGCCGAGGGAGCGCTGGCGGTGGATGCGTTGATCCGGCTGGCCAATGGCTGAAGGCCGGGGG GACACGACGGCTCCCCCTCCCGCTTGTGGGAATGGGAGCAAGAGCGCTGCGGCGCGAACGGCGACTCCGATGGTCGCCGAACTGGACGAGGATATTGCCC
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| DNA Sequence for Gene |
>AJ63_01770
ATGCAACCACAGAAGACCCTCACCGCCGGCCAGGCCCTGGTCCGCTTGCTGGCCAACTACGGCGTGGATACCGTTTTCGGCATCCCCGGCGTGCATACCC TGGAGCTGTACCGCGGACTTCCGGGCAGCGGCATCCGCCACGTGCTGACCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGTTATGCGCGGGTCAG CGGCAAGCCGGGAGTGTGCTTCGTCATCACCGGGCCGGGCGTGACCAACGTCGCCACCGCCATCGGCCAGGCCTACGCCGACTCGGTGCCGCTGCTGGTG ATTTCCAGCGTCAACCACAGCGCCAGCCTGGGCAAGGGCTGGGGCTGCCTGCACGAGACCCAGGACCAGCGTGCCATGACCGCGCCGATCACTGCCTTCT CCGCCCTGGCCTTGAGCCCGGAACAGCTGCCCGAACTGATCGCCCGGGCCTACGCGGTGTTCGACAGCGAGCGTCCGCGCCCGGTGCATATCTCGATCCC GCTCGACGTGCTTGCCGCGCCGGTGGCCCATGACTGGAGCGCTGCCGTGGCGCGCCGCCCTGGTCGTGGCGTGCCGTGCACCGAGGCATTGCGGGCGGCG GCGGAGCGCCTGGCTGCGGCCCGGCGACCAATGCTCATCGCCGGCGGCGGCGCGCTGGCGGCCGGCGATGCGCTTGCCGCGCTGAGCGAGCGCCTGGCCG CGCCGCTGTTCACCAGCGTCGCCGGCAAGGGCCTGCTGCCGCCGGACGCGCCGCTCAACGCCGGGGCCAGCCTGTGCGTAGCGCCGGGCTGGGAGATGAT CGCCGAGGCCGACCTGGTGCTGGCGGTGGGCACCGAGATGGCCGACACCGACTTCTGGCGCGAACGCCTGCCGCTGTCCGGCGAACTGATCCGCGTCGAT ATCGACCCGCGCAAGTTCAACGACTTCTATCCCTCTGCCGTGGCCCTCAAGGGCGACGCCCGGCAGACCCTTGAGGCGCTGCTGGCGCGCCTGCCGCAGG AGGCCCGCGACGCCACACCGGCCGCCGCGAGGGTGGCGCGCCTGCGCGCGGAGATCCGCGCGGCACACGCGCCGCTGCAGGCGCTGCACCAGGCGATCCT CGACCGGATCGCCGCCGCGCTGCCGGCCGATGCTTTCGTCAGCACCGACATGACCCAACTGGCCTATACCGGCAACTACGCGTTCGCCAGCCGAGCGCCG CGCAGCTGGCTGCATCCCACCGGCTACGGCACCCTCGGCTACGGCCTGCCGGCCGGCATCGGCGCCAAGCTCGGCGCCCCGCAGCGCCCAGGCCTGGTGC TGGTCGGCGATGGCGGCTTCCTCTACACCGCGCAGGAACTGGCCACCGCCAGCGAGGAACTGGACAGTCCGCTGGTGGTGCTACTGTGGAACAACGACGC GCTCGGCCAGATCCGCGACGACATGCTCGGCCTGGATATCGAGCCGATCGGCGTGCTGCCGCGCAACCCCGACTTCGCACTGCTGGGCCGCGCCTACGGT TGCGCGGTGCGCCAGCCGCAGGACCTGGACGAACTGGAGCGCGACCTGCGCGCCGGCTTCGGGCAGCCCGGCGTGACCCTGATCGAACTGCGGCACGCCT GCGCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCCGGACAAGGAGAGCATCCATGCGCTATTCCGATTTCACCCAACGTATCGCCGGCGACGGCGCCGCTGCCTGGGACATCCACTATCGCGCGCTGGCA CGGGTCGAGCAGGGCGAGGAAATCCTCCTGCTGTCGGTCGGCGACCCCGACTTCGACACCCCGGCGCCCATCGTCCAGTCGGCCATCGACAGCCTGCTGG CCGGCAACACCCACTACGCCGACGTGCGCGGCAAGCGCGCCCTGCGCCAGCGCATCGCCGAGCGCCACCGGCGGCGCAGCGGCCAGGCGGTGGACGCGGA GCAGGTGGTGGTGCTGGCAGGTGCCCAATGCGCGCTGTACGCGGTGGTGCAGTGCCTGCTGAATCCGGGCGACGAGGTGATAGTCGCCGAGCCGATGTAC GTCACCTACGAAGCGGTGTTCGGCGCCTGTGGCGCGCGGGTGGTGCCGGTGCCGGTGCGCTCCGAGAATGGCTTCCGCGTGCAGGCCGAGGAGGTCGCCG
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| Amino Acid Sequence |
>decarboxylase
MQPQKTLTAGQALVRLLANYGVDTVFGIPGVHTLELYRGLPGSGIRHVLTRHEQGAGFMADGYARVSGKPGVCFVITGPGVTNVATAIGQAYADSVPLLV ISSVNHSASLGKGWGCLHETQDQRAMTAPITAFSALALSPEQLPELIARAYAVFDSERPRPVHISIPLDVLAAPVAHDWSAAVARRPGRGVPCTEALRAA AERLAAARRPMLIAGGGALAAGDALAALSERLAAPLFTSVAGKGLLPPDAPLNAGASLCVAPGWEMIAEADLVLAVGTEMADTDFWRERLPLSGELIRVD IDPRKFNDFYPSAVALKGDARQTLEALLARLPQEARDATPAAARVARLRAEIRAAHAPLQALHQAILDRIAAALPADAFVSTDMTQLAYTGNYAFASRAP RSWLHPTGYGTLGYGLPAGIGAKLGAPQRPGLVLVGDGGFLYTAQELATASEELDSPLVVLLWNNDALGQIRDDMLGLDIEPIGVLPRNPDFALLGRAYG CAVRQPQDLDELERDLRAGFGQPGVTLIELRHACAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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