Pseudomonas aeruginosa 3576, AJ63_00841
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3576 adVri-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGAAGACGGCGTGATCCGCCTGCATGGTCGGCGCGAAGGAAGTTGCTGGTGGCTTTGCCTGGAAGACCAGGGCGAGGGTGTGGCCGAGCACCAGTTGGAG ACCATCTTCCGCCCGTTCACCCGGCTGTCTTCGGCACGTACCGGCAAGGGCTTCGGCCTGGGACTGAGCATTGCCCGTCGCGCCGTGGTGCTCCAGGGCG GCCGCCTATGGGCGGAAGCCGCCGATCCGGGGCTGCGCCTGTGCCTGGTGCTGCCTTCTGCCTAGCGAGGCGCAGGTGCCTTTACATTTGGCCTGGATGT AAATGATCTTTACTCTCTTTTGTTAATGATTATCATCCGTGTCGATCTCCTCGGCCGGCCTTGTTCCGGGTCTGCGCCCTGTCCTACCCGTGCCGAGACG TCACCCGCGCAACGCCGGCGACCCAGGCTTCAGAAAAAACGTCAACGTATCCCTCGTGGCTCGCCTGCTACCCGTTTTCCCTCGACAGGAGTAGTCACGC
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| DNA Sequence for Gene |
>AJ63_00841
ATGTACCCCCAATTCCGTCGCGGCCATCTCGCCGCTGCCGTCCTTTTCGCTTCATCGAGCCTGCTGGGCGGGCAGGCCCTGGCCGAGGACGAGCGCCTGG AAGAACTGGACGAACGCGCCGAATCGGTGGTCCAGCTGGGTGACGAGGTGGTGCTGGGCACCGCCGAACAGGAGCTCAAGCAGGCACCGGGGGTATCCAT CATCACCGCCGAGGACATCAGGAAGCGCCCGCCGGTGAACGATCTCTCCGAAATCATCCGCACCATGCCCGGGGTCAACCTCACCGGCAACAGTTCCAGC GGCCAGCGCGGCAACAACCGGCAGATCGACATCCGCGGCATGGGGCCGGAGAACACCCTGATCCTGGTCGACGGCAAACCGGTCAGCTCGCGCAACTCGG TGCGCTACGGCTGGCGCGGCGAACGCGACACCCGCGGCGACAGCAACTGGGTGCCGCCGGAGGAGGTCGAGCGCATCGAGGTCCTCCGTGGGCCCGCGGC GGCACGCTACGGTTCCGGCGCGGCGGGCGGGGTAGTCAACATCATCACCAAGCGCCCGACCGATCGTTTGCGTGGTTCCATGACGGTGTTCACCAACATT CCGGAAAGCTCCAAGGATGGCGCCACGCGCCGCGCCAACTTCAGCCTCAGCGGGCCGCTGACCGAAGCCTTGAGCTTCCGCGCGTACGGCAGCGCGAACA AGACCGATTCGGACGATACCGACATCAACCTCGGACATACCGTCAACCCGAGCCGTACCGTGGCCGGACGCGAAGGGGTACGCAATCGCGATCTCAGCGG GATGCTGTCGTGGCAGGTGACCCCCGACCAGGTCGTCGATTTCGAAGCGGGCTTCAGCCGACAGGGCAACATCTATGCCGGCGATACCCAGAACAACAAC GGCACCGCCAATACCCAGGGACTCGCCGACGACGGTGCGGAGACCAACCGCATGTATCGCGAGAACTACGCCATCACCCACAACGGGACCTGGTCGTTCG GTACTTCCAGGTTCGTCGCCCAGTACGACTCCACCCGCAACAACCGTCTGGAGGAGGGGCTGGCCGGTTCCGTCGAGGGGCAGATCGGCGCCGACCGTTC GTTCAGCACCAGCAAGCTGGAGAACTATCGCCTCAGCGGCGAACTCAACCTTCCGTTGCATGCGTTGTTCGAGCAGGTGCTGACGGTGGGCGCGGAGTGG AACAAGGAAACCCTCAACGACCCGTCCTCGCTCAAGCAGGGCTTCGTGGGAAGCGATAGCTTGCCGGGGACCCCCGCGGCCGGCTCGCGAAGCCCGAAAA GCAAGGCGGAGATCCGCGCGCTGTACGTGGAGGACAATATCGAACTGCGCCCCGGCACCATGCTCACCCCCGGGCTGCGCCTGGACGATCACAGCGACTT CGGCCTGAACTGGAGCCCGAGCCTGAACGCTTCCCAGACGCTCGGCGAATACTTCACGGTCAAGGCCGGTATCGCACGGGCCTTCAAGGCGCCCAACCTG TACCAGAGCAACCCGAACTACCTGCTCTATACCCGTGGCAACGGCTGCCCGATCCAGACCAGCAGCGGCGGCTGCTACCTGGTCGGCAACGAGAACCTGG ACGCCGAGACCAGCGTAAACAAGGAACTGGGCATCGAGTTCCGGCGCGACGGCTGGGTCGCCGGGCTCACCTACTTCCGCAACGACTACAAGAACAAGAT CGTCGCGCCGCTGGATGTCATGGGGCAGACCGGGACCGGTAACAACATCCTGCAATGGAGCAACGCGAAGAAAGCAGTGGTCGAGGGCCTGGAAGGCAAC CTGCTGGTCCCCCTGCACGAGGACCTGAGCTGGAGCACCAACCTGACCTATATGCTGCAATCCAAGGACAAGGACACCGACAACCCGCTTTCGGTGATCC CCGAGTACACCCTGAACTCGACCCTGGACTGGCAGGCCAGCGAGCGTCTTTCCACCCAACTGACCAGCACCATCTACGGCCGCCAGGAGCCGCCGAAGCA TGGCACCAGCCGCAACACGCCGGTGGTCTCGCGAAAAGAGGTGGGTACCTATGGCATCTGGGGCGTCAGCGCCGGCTACACCTTCAGCGAGAACCTGAGC GTACGGGGCGGGGTAAGCAACCTCTTCGACAAGCGCCTGTACCGCCAGGGCAACTCCTTCGACGCCGGCGCGGCAACCTACAACGAGCCGGGTCGCGCCT ACTACGTTTCGATGACCACCTCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCCGCGGCCAACGTGCTTTCACCGGCAGGCGCAACGCCTGTCGGACCTTTCTTTGGCGTTGGTCAGGCATCGGCTGTCCAACGCCAGGTTTTCTCTTC GGACGCCTCTGGTCATCGCATCGCATACCGTTTCGGGCGGTCTTTCGGCTGAATCGGCATGCATGACCGGATATTGCGGTGCTAGGGTCCGGCCCCAGTT TCCCGGTATCATGCTCAGCCTTTACCGTCAGTGCCGAACGAGTGCCTCCATGACAGTGCAGTACCCGACTATCGCCGACTGCGTTGGCAATACCCCTCTG GTGCGTCTGCAGCGCCTTCCCGGGGAAACCTCCAATACCCTGCTGGTGAAGCTCGAAGGCAACAACCCGGCGGGATCGGTGAAGGACCGCCCGGCCCTGT CGATGATCACCCGTGCCGAACTGCGCGGCGACATCCGCCCCGGCGATACGCTGATCGAGGCTACTTCCGGCAACACCGGCATCGCCCTGGCCATGGCGGC
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| Amino Acid Sequence |
>outer membrane receptor protein
MYPQFRRGHLAAAVLFASSSLLGGQALAEDERLEELDERAESVVQLGDEVVLGTAEQELKQAPGVSIITAEDIRKRPPVNDLSEIIRTMPGVNLTGNSSS GQRGNNRQIDIRGMGPENTLILVDGKPVSSRNSVRYGWRGERDTRGDSNWVPPEEVERIEVLRGPAAARYGSGAAGGVVNIITKRPTDRLRGSMTVFTNI PESSKDGATRRANFSLSGPLTEALSFRAYGSANKTDSDDTDINLGHTVNPSRTVAGREGVRNRDLSGMLSWQVTPDQVVDFEAGFSRQGNIYAGDTQNNN GTANTQGLADDGAETNRMYRENYAITHNGTWSFGTSRFVAQYDSTRNNRLEEGLAGSVEGQIGADRSFSTSKLENYRLSGELNLPLHALFEQVLTVGAEW NKETLNDPSSLKQGFVGSDSLPGTPAAGSRSPKSKAEIRALYVEDNIELRPGTMLTPGLRLDDHSDFGLNWSPSLNASQTLGEYFTVKAGIARAFKAPNL YQSNPNYLLYTRGNGCPIQTSSGGCYLVGNENLDAETSVNKELGIEFRRDGWVAGLTYFRNDYKNKIVAPLDVMGQTGTGNNILQWSNAKKAVVEGLEGN LLVPLHEDLSWSTNLTYMLQSKDKDTDNPLSVIPEYTLNSTLDWQASERLSTQLTSTIYGRQEPPKHGTSRNTPVVSRKEVGTYGIWGVSAGYTFSENLS VRGGVSNLFDKRLYRQGNSFDAGAATYNEPGRAYYVSMTTSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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