Pseudomonas aeruginosa 3575, AJ62_06080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3575 adTyh-supercont1.43, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCTAGCGCTGCGTCCTGCCCATGCTCCAGCCGCCAGACCGAACGGCGGGCGATAGTCGGACAGGCCCTTTGATCATGACCGCCACGGTCGCGATACGGA ATCGCGCTCAGCCGCTACTCCGCCCCACTGTTTCCGCCGCTTCCGCAGCCGAGCCCATTATCACCGGAGTTTTTTCCTACAGCAGTCCTCCCAGTCCCCT ACGAAAACCAAGAAGTTCTACCGGCCAACGCCAGAAAACTACGATTGTCGCCGTTTCAGCCTCGCCCCAGGCTATCGCCCACTCGATTCTCCGCCTTGAA ACCGATCGTTCTGCACATGCCTGCGGATATCGGTTTCTTTTCCCTGCAAGAACCGCGCTCCGGGCCGATTGACCATGCATCCAGCTTTTCCGCGTAACCA GGCTAGCCTTTCTTTCCCGCCGCCCTCCCCAAAGCCTTCCGGCAGTTCCACTTCGATCGTTCCATCCCTCAGGGCCGGACCGCTGCTCCGTACGGGCCTC
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| DNA Sequence for Gene |
>AJ62_06080
ATGGGAATGGCCATGCTGTCGTCCGGCCTTGCCAGTGCCGCCCCGGATGCGGGGCAGGCGCTGCGTGACGTGGAAAGCCGACGCCTGAACCTGCCCGCGC CGGTGGAACTGGACGCCGAGCGCCCCAGCCCCGAGGACGGCGTATCACGGGCTGCCGAAGAGGGCGGCCCGACGGTGCTGGTCAAGCGCTTCCAACTCAG CGGCAACAGGCAGTTCGACGATCGACGCCTGCTGGCGCTCCTGCACGACCTGCCGGGCCAGGAACTCAATCTGAGCCAATTGCACGCCGCCGCCGCCCGC ATCGGCGATTTCTATCGGGAAAAGGGATATGTGCTGGCGCGCGCCTTCCTCCCGGCACAGGAAATCCAGGATGGAACGGTACGCATCGAAGTGCTCGAGG GGCGCTACGGCAGGATCGAACTGCACAACACGTCCCGAACGCTGGACCGCGTTCTACTCCGCCCCTTGAGCGCACTCGAACGAGATACCGCGGTCCAGGG CTCCGAGCTGGAGCGTGCGCTTCTGCTCCTGAGCGACATTCCCGGCCTCCAGGCCAAAGGCACCCTGCTGCCGGGCCAGGCGCAGGGAACCACGGACTTG CGCGTCGAGGCCCGCCCCGGCCCGCTGGTCGGCGGCAGGCTGGAGGCAGACAACTATGGCGGCCGCTACATGGGGGAATATCGCCTGGGAACCACCCTCG ACTTCAACAGCCCGCTGCGACTGGGCGACCAGGCGAGACTGAGCCTGCTGGGCAGCGACCGGCACCAACGCTACTACCGTGCAGCCTATCAACTGCCCCT TGGTTCCCGAGGCACGCGCATCGGACTGGCCCACGCCGAGACGACCTATCGACTGGTACGCGATTTCTCGCGCCTGGACGCCCATGGCCGGGCCATTACC GACAGTCTGTTCGTCAGCCAGCCCCTGCTGCGTAGCCGCAGCTTAAGCCTGTCCACCCAGTTGCAATATGAAAACAAGCGACTTCGCGATGACCAGGAGC GTACCGGGAGGCATAGCCGCAAGGAGATCCGCCTGTGGACCGCCAGCATCAGCGGAAACGCCCAGGACCGCTTGTTCGGCGGTGGACAGAGCGGCTTCTC GCTGGCCTATGCCCACGGCCAGCTCGCCATCGACTCCGCCGAAGAGCGGCTGCTGGACCGCTACACCATCGGTACCGCCGGCAGCTTCGACAAGATCATG CTCAACGCCGTACGCCTGCAGCACCTGGGCGACCGCCTGCAGTTGTTCGCCCAACTCAACGCCCAGTGGAGCGGCGGCAACCTCGACAGCGCGGAACAGT TCGACATGGGCGGCCCCTACGGCGTTCGGGCGTTCCCCCTGGGCAGCTACAAGGGCTACGGCGACGAAGGCTGGCAAGCCAGTGCGGAGCTGCGCTACAG CCTGGCTCCGGGCTGGCAGCTGAGTTCGTTCGTCGACCAGGGCGCGGTGAAATTCCTCAAGCACCCCAACACCACGGAAGGCAATCGCAACCGCATGGCC GCCGTCGGCAGCGGCGCAACCTGGTACGGAACGGATCACCAGGTCAGCCTGACCGCCGCCTGGCCCCTGAGCCAGGAAAACAACATCGAGCCCGAGCGCA CTCCCCGGCTGTGGTTGCAAGCGACCCGCTACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAAGCTCCCGCCCGCCATGCCGGCGGGCCCCACTGAAAGGAAAAGCCATGAACAAGAGCTATACGCTGGTCTGGAACCAGGCCACAGGCTGTTGGAACG TCGCAAGCGAAGGTACCCGTCGGCGCAGCAAGAGCGGACGCGGCAAGGCGCTCGTAGTCGCCGGAGCGTCACTGCTCGGCCTGTTCTGCCAGGCCCCCGC CTTCGCCCTGCCCAGCGGCGCCACGGTCGTTTCAGGCGATGCCGGATTCCAGACATCCACCGATGGCCGGCATATGGTCATCGACCAGCAGAGCCACAAG CTGATCACCAATTGGAACGAGTTCAGCGTCCGTGCCGATGAGCGGGTCAGCTTCCACCAGCCGGGCCAGGACGCCGTCGCCCTGAACCGGGTGATCGGCC GCAACGGCAGCGATATCCAGGGGCGGATAGATGCCAACGGCAAGGTCTTCCTGGTCAATCCCAACGGCGTGGTCTTCGGCAAGTCCGCCCAGGTCAATGT
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| Amino Acid Sequence |
>membrane protein
MGMAMLSSGLASAAPDAGQALRDVESRRLNLPAPVELDAERPSPEDGVSRAAEEGGPTVLVKRFQLSGNRQFDDRRLLALLHDLPGQELNLSQLHAAAAR IGDFYREKGYVLARAFLPAQEIQDGTVRIEVLEGRYGRIELHNTSRTLDRVLLRPLSALERDTAVQGSELERALLLLSDIPGLQAKGTLLPGQAQGTTDL RVEARPGPLVGGRLEADNYGGRYMGEYRLGTTLDFNSPLRLGDQARLSLLGSDRHQRYYRAAYQLPLGSRGTRIGLAHAETTYRLVRDFSRLDAHGRAIT DSLFVSQPLLRSRSLSLSTQLQYENKRLRDDQERTGRHSRKEIRLWTASISGNAQDRLFGGGQSGFSLAYAHGQLAIDSAEERLLDRYTIGTAGSFDKIM LNAVRLQHLGDRLQLFAQLNAQWSGGNLDSAEQFDMGGPYGVRAFPLGSYKGYGDEGWQASAELRYSLAPGWQLSSFVDQGAVKFLKHPNTTEGNRNRMA AVGSGATWYGTDHQVSLTAAWPLSQENNIEPERTPRLWLQATRYF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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