Pseudomonas aeruginosa 3575, AJ62_05381

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04055
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04055
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF005963
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016992 lipoate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF005963
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009107 lipoate biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF005963
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF005963 Lipoyl_synth IPR003698 Lipoyl synthase 6 327 4.5E-128
SMART SM00729 MiaB IPR006638 Elp3/MiaA/NifB-like, radical SAM core domain 90 299 1.1E-13
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 87 307 1.5E-19
SUPERFAMILY SSF102114 Radical SAM enzymes - - 56 322 9.03E-68
SFLD SFLDG01058 lipoyl synthase like - - 39 324 0.0
NCBIfam TIGR00510 JCVI: lipoyl synthase IPR003698 Lipoyl synthase 38 321 2.9E-127
Hamap MF_00206 Lipoyl synthase [lipA]. IPR003698 Lipoyl synthase 1 327 153.716309
Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IPR031691 Lipoyl synthase, N-terminal 43 79 2.2E-7
CDD cd01335 Radical_SAM - - 97 272 1.70947E-7
PANTHER PTHR10949 LIPOYL SYNTHASE IPR003698 Lipoyl synthase 40 322 1.7E-115
Pfam PF04055 Radical SAM superfamily IPR007197 Radical SAM 97 256 1.2E-14
FunFam G3DSA:3.20.20.70:FF:000023 Lipoyl synthase - - 87 298 4.9E-119
SFLD SFLDF00271 lipoyl synthase IPR003698 Lipoyl synthase 39 324 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.