Pseudomonas aeruginosa 3575, AJ62_04826
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3575 adTyh-supercont1.21, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAGTCATATCCGTGCTCAGGTGGCGGAAAAACCTGTTCGCCATGGTCTCACGGCGGATGAGCTGATTGGTGTGTTCGAAACCGTGGCGACCTTGCGCA AGCTCTGCTGGGATGCCGCCGAACTCGCAGGGCTCGTTGCCGGGGTTCATTGCTGGTGGGTCGAAGGGCGCGAGGCGGAGGCGCGGCAGTTCCAGGCGCA GATGTCTTTCACCTTGGCGCGAGAAACCTTCTGCCAGGCCGAGCACGACACGATCATGCAGGACGAGCGCCTGTTGCAGGAGCTTGACGAGGCTAGCGAG CGGTCTTTGAAGCAACGTACGTAGCGCGTCGACAAACGAGGGCCGGGCCGGGTTTTACCTACAGGTAAACCCGGCCCGGGTATGTCCGGGGTAACGAAAT ACGACAGTTGAGTTTTTTTTCCGGTTTTTCCTGCTGAGACGTCTTTGTAATTGATAAGTATTCTTAAATATTTATCCATACGAAATATATGGAGAAAAAC
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| DNA Sequence for Gene |
>AJ62_04826
ATGCCAACAGCACATGCGGTTTCCCCTCTGGCAAGGGCTTTAGGAAGTTTGGGGGCAAACAAGATGTCCAGGCTTGGCCTGGCCCTTCTGCTGGTGAGCG CCCAGGCGGTCGCGCAGGAGTACGAATTCAACGTTCCCGCCCAGCGGCTCGACGCGGCGCTTCAGGCGCTTGGCCGCCAGGCGGGTCTGCAGGTGCTCTA CAACCCGAGCGACCTGAGTGGTCTGCGTAGCCGCAGTGTCAGCGGCAAACTCGAATTGGAACAGGCGATCAGCCAACTGCTGGATGGGGCCAACGGTATC GGTTTCGAACTGCAGGGCAAAACCCTGATCCTGCGCCTGCAGGACTCCTCTTCGGTGATATCCCTGGATTCAATGGTGGTTTCAGGCCTGGCGCTGAATC CCACTACTGAGAACAGCGGCTCCTATGCCTCGCCTGCGGTGTCGATCGGCAAGGGCAACAAGAGCATCAAGGAAATTCCCCAATCGGTGACGGTGGTCAC CCAGAAACGGATGCAGGACCAGAACATGTCCACCGTATCCGATGTCCTGGCCAACGCGCCGGGCGTTACCTCCATCCCGATGTTCGGTACCGGCGAGCAG TACTACTCTCGCGGTTTCTTCATCGAAAACTTCCAGTACGACGGTGTACCCCTGGAGCGCCAATCCTATGCCCGTGGTTCGGACTTCAGCGGGCAGACCG CGATCTTCGATCGGGTAGAGATTCTCCGGGGTGCGCAAGGTCTGCTGGAGGGCGGCGGCAATCCCTCGGGCTCGGTCAACTTCGTGCGCAAGCGACCGAC GGCGGAGAACCAGGTCCGGCTGACTGCCAAGGCCGGCTCCTGGGATCACTATGGTACCCAGGCCGATATCTCCGGCCCGATCGACGAACAGGGAAGACTG CGAGGGCGCCTAGTTCTCGACTACGACACCAAGAACTCGTTCGTCGACCACGTAGGCGATGACCGCCAGACCATCTATGCCGCGCTCGATTACGATCTTA CGGAAGCTACACGCCTCGGCTTCGGCTTCAGTCGCGAGCGGATCGACGCCAACATCGATGTCAACGGCTTGCCCAACTATACCGATGGTTCGATGCCGCA TTTCAGTCGCTCGACTTTCCTCGGCGGCGACTGGTCCTACTGGGACAAGATCCAAGAGACCTTCTACTTCGATATTGCCCACCAGTTCAACGAAGACTGG TCGTTGAATGCCACGGTGGTCAATGCGCGCGAGAAGAACGACTACAAGTACCTGCTGATGGCCGGCAGCATCAATCCGGACAATACCAGTACGCTGCGGG GAGATGCCTACGTCTTCGACTTCTTTTCCGAGCACTGGGGCGGGGATGTCTATGTCAATGGTCGTACCAAGGTTGCCGATCGCCAGCTGAACCTTACATT CGGGGCGAACTATTCGGACCTGGACAGCAGCGATACCTTCGGCTGGAGGCAGCGCTACGTACCCAACTGGGATATCTTCAACTCGCCGGTCAATACCAAC AAACCATCCGATGACGACATCTATTCCGTCAGGCGCAGCGACGATGGCTACGCTTCGATCCAGAAAGGCGTCTACGGCATGGGGCAATACTATCTGACCG ACGACCTGTCCGTAGTGCTCGGGACTCGCATTTCGTCCTACCAGAAGGCTTATACCTCCAATGGGCCTTGGGGTTATTCGAAGGCGGTGGCCAAGGAGTC GGCGAAGGCCATTCCCTATGCCGGCATCATCTACGACCTCAATCCGGAGTGGAGTGCGTATGCCAGCTTCACCAAGATCTTCCTTCCGCAGTCGGTGCGT ACCGCGAGCGGCAGCATCCTGGGACCGAAAAGCGGGAAAAGCGTCGAGACCGGTCTGAAAGGCATCCTCAACGATGGCCGCTTGAATGCCACCTTCGCGC TGTTCCGCATGGAACAGGACAACATCCCGATCCAGGACGCCAACCTGCCCGATGACGTTCAGGAAGCCAACTGCGGCGGTACCTGCTACCACGGCGGCGG CAAGGCTATCAGCCGCGGCTTCGAGACCGAGCTCAGCGGCGAGTTGTTCGACAACGTGCAGGTATATGCCGCCTACACCCTCAACCTGCTGCGTTACCAG GGCGAGGTGCCCAGCGAAGCGGATGACGTTGGCGCCAGCGTCAATACACCGAAGCACATATTCCGCTCCTGGGTCGACTACCGGTTGCCGGGCAATTGGT CGCGGGTATCCGTCGGCGGCGGCGTCAATGCACAGAGCCGGTCGGCCGGGTTCGGCTACTACGGACGGGAGCAGAGCGGCTTCGCGGTATGGAACAGTCG CCTGGCTTATCGCTTCACCGAAGAGCTGACCGGTGCGATGAACGTCAACAACATTTTCGACAGGCGCTACTTCAAGTCCGTCGACTATGGCCACAACTAC TTCGGCGATCCGCGCAACGTGCTGTTCACGCTTACCTATAGCTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGCTGACGGCCGGTCATCGGGCCTGCCGGAACGGGAACTGTACGAATGCCGGCCTTCGGGCCGGCTTTTTTCTATCCGTTCGGAATCCGGGTGACGGC CAGCAGGGTTGTTGGCGATTCTCGTCGGCTGGTCCGTGACGAGCACGACGGTGCGTCATTGCCGGCAGTGCAGGCACAAAGATAGAGGCGCGCAGCTAAT GTTGGGCGACTGGGCGACTGGGCGACTGGGCGGCGGCGATGTCTTCAGCACGCTTCGCAGTAGAAGAGAGGGAGTCGAGAGACGCAGAGACGGGCTGGCT GAGCGGGCGATACGACGTGTGGAAAGGCGGTTTGTCGGGGTGAGCTTCGCTGCTGCCTCACCGCGAGGCGGGAAGGGCGGACGGGACGCCATGGTGTCCC GTCAGGCTGATGTCTATCAGGCGGGGTGCAGCGCGGGTTCCACAATCTGGCCGGCGTGCATATGTACCAATTTGTCGGCGATGTCGAAGTAACGGTCGTC
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| Amino Acid Sequence |
>hypothetical protein
MPTAHAVSPLARALGSLGANKMSRLGLALLLVSAQAVAQEYEFNVPAQRLDAALQALGRQAGLQVLYNPSDLSGLRSRSVSGKLELEQAISQLLDGANGI GFELQGKTLILRLQDSSSVISLDSMVVSGLALNPTTENSGSYASPAVSIGKGNKSIKEIPQSVTVVTQKRMQDQNMSTVSDVLANAPGVTSIPMFGTGEQ YYSRGFFIENFQYDGVPLERQSYARGSDFSGQTAIFDRVEILRGAQGLLEGGGNPSGSVNFVRKRPTAENQVRLTAKAGSWDHYGTQADISGPIDEQGRL RGRLVLDYDTKNSFVDHVGDDRQTIYAALDYDLTEATRLGFGFSRERIDANIDVNGLPNYTDGSMPHFSRSTFLGGDWSYWDKIQETFYFDIAHQFNEDW SLNATVVNAREKNDYKYLLMAGSINPDNTSTLRGDAYVFDFFSEHWGGDVYVNGRTKVADRQLNLTFGANYSDLDSSDTFGWRQRYVPNWDIFNSPVNTN KPSDDDIYSVRRSDDGYASIQKGVYGMGQYYLTDDLSVVLGTRISSYQKAYTSNGPWGYSKAVAKESAKAIPYAGIIYDLNPEWSAYASFTKIFLPQSVR TASGSILGPKSGKSVETGLKGILNDGRLNATFALFRMEQDNIPIQDANLPDDVQEANCGGTCYHGGGKAISRGFETELSGELFDNVQVYAAYTLNLLRYQ GEVPSEADDVGASVNTPKHIFRSWVDYRLPGNWSRVSVGGGVNAQSRSAGFGYYGREQSGFAVWNSRLAYRFTEELTGAMNVNNIFDRRYFKSVDYGHNY FGDPRNVLFTLTYSY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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