Strain | Pseudomonas aeruginosa 3575 adTyh-supercont1.15, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCTGCCGCCGGTCGCTGCCGACGGGCCGCTGATGGCCGGCTACATCCCGCAGGAAAGCCTGGCCGGTTTCGAGTCGCTGACCGGCGCCGGTGTGCTCGG TGGCATGAGCGCAGGGACTGCGCTGCTGGTCGGTGCGGCGGCCATCGGCGCCGGGGTGGCGATTTCCAACAGCAGCGGCGGCGGTGGCGGCGGCGGTTCT TCGGTGCCCCCGGACACCACTCCGCCGAAGGCGGCCAGCGGCCTGAAGATAGCGCCTGACGGCAGCAGCATCAGCGGCCAGGCCGAGGCCGGCGCGAGCG TCGGCATCGATACCAATGGCGACGGCAAGCCGGACCTCACCGTGATCGCCGATGCCAACGGCAATTTCACCGCTCCGCTGAACCCGCCGCTGACCAATGG CCAGACGGTCACCGTGGTGGTCACCGACCCGGCTGGCAACGCCAGCCCGCCGGCCCAGGTCACCGCTCCGGACACTACCGCCCCGGCGCCGGCTACCGAC
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DNA Sequence for Gene |
>AJ62_04136
GTGCAGGTGGCGCCGGACGGCAGCAGCGTCACCGGCAAGGCCGAACCCGGCTCGACGGTGGGCGTCGATACCGACGGCGACGGCCAGCCGGACACCACCG TGGTGGTCGGCCCCGGCGGCAGCTTCGAGGTTCCGCTGAACCCGCCGCTGACCAATGGCGAGACGGTGACGGTGATCGTTACCGACCCGGCCGGCAACAA CAGCACCCCGGTGACCGTCGAGGCGCCGGACACCACAGCCCCGGCGCCGGCCACCGACGTGCAGGTGGCGCCGGACGGCAGCAGCGTCACCGGCAACGCA GAGCCGGGCGCCACCGTCGGTGTCGACACCGATGGCGACGGCCAGCCGGACACCACCGTGGTGGTCGGCCCCGGCGGCAGCTTCGAGGTCCCGCTGAACC CGCCGCTGACCAATGGCGAGACGGTGACGGTGATCGTTACCGACCCGGCCGGCAACAGCAGCACCCCGGTCACCGCCGAAGCCCCCGACTTCCCCGACGC GCCCCAGGTCAATGCCAGCAACGGCAGCGTCCTCAGTGGTACGGCGGAAGCGGGCGTGACCATCGTGATCACCGACGGCAACGGCAATCCGATCGGCCAG ACCAGCGCCGATGCCAACGGCAACTGGAGCTTCACCCCCGGTAGCCAACTGCCGGATGGCACCGTGGTCAATGTGGTGGCCAGGGACGCCGCCGGCAACA GCAGCCCGGCGACCTCCATCACCGTCGACGGCGTGGCGCCGAGCGCGCCGGTGGTCGAGCCGAGCAACGGCAGCGAACTCAGCGGGACTGCCGAACCGGG CAGCAGCGTGACCCTGACCGACGGCAATGGCAATCCGATCGGCCAGACCACCGCCGATGCCAACGGCAACTGGTCTTTCACGCCGTCCACCCCGCTGCCG GACGGTACCGTGGTCAACGTGGTGGCCAGGGATGCCGCCGGCAACAGCAGTCCGCCGGCCAGCGTTACCGTGGATGCCGTCGCGCCGGCCACGCCCACCG TCGATCCGAGCAACGGTACGACCCTCAGCGGCACCGCCGAGCCGGGCGCTACCGTGACCCTGACCGACGGCAACGGCAATCCGATTGGCCAGGTCACCGC CGACGGCAGCGGCAACTGGACCTTCACCCCGAGCACGCCGTTGCCCAACGGCACGGTGGTCAACGCCACGGCTACCGACCCGTCCGGCAACGCCAGTTCG CCGGCCAGCGTCACCGTGGACGCCGTGGCACCGGCCACGCCAGTGGTCAACCCGAGCAACGGCACCACGCTCAGCGGTACCGCCGAGCCGGGCGCTACCG TGACCCTGACCGACGGCAACGGCAACCCGATAGGGCAGGTCACCGCCGACGGCAGCGGCAACTGGAGCTTCACTCCGACCACGCCGTTGCCCAACGGCAC CGTGGTCAACGCCACGGCCACCGACGCCTCCGGCAACACCAGTGCGGGCAGCAGTGTCACCGTGGACTCGGTAGCCCCGGCCACGCCAGTGATCAACCCC AGCAACGGCACCACGCTCAGCGGCACCGCCGAGCCGGGCAGCAGCGTGACTCTGACCGATGGCAACGGCAACCCGATTGGCCAGGTCACCGCCGACGGCA GCGGCAACTGGAGCTTCACCCCGTCCACGCCGCTGGCGGATGGAACCGTGGTCAACGCCACGGCCACCGATCCGGCGGGCAACACCAGCGGCCAGGGCAG CACCACCGTCGATGGCGTGGCGCCGACCACGCCGACCGTCAACCTGAGCAACGGCAGCAGCCTCAGCGGCACTGCGGAACCGGGCAGCACGGTGATCCTC ACCGACGGCAACGGCAATCCGATCGCCGAGGTCACCGCCGACGGCAGCGGCAACTGGACCTACACCCCGTCCACGCCGATCACCAACGGCACCGTGGTCA ACGTGGTGGCCCAGGACGCCGCCGGCAATAGCAGCCCGGGCGCCAGCGTCACCGTGGACTCGCAGGCCCCGGCGGCTCCGGTGGTCAACCCGAGCAACGG CACTACGCTCAGCGGCACCGCCGAGCCGGGCGCTACCGTGACCCTGACCGACGGCAACGGCAACCCGATTGGCCAGGTCACCGCCGACGGCAGCGGCAAC TGGAGCTTCACACCGGGCACGCCGCTGGCCAACGGCACCGTGGTCAACGCCACGGCCAGCGACCCGACCGGCAATACCAGCGCTCCGGCCAGCACCACCG TGGACTCGGTGGCGCCGGCCGCGCCGGTGGTCAATCCGAGCAACGGCGCGGAGATCAGCGGCACCGCCGAACCGGGCGCCACCGTGACCCTGACTGATGG CAGCGGCAATCCGATCGGGCAGGTCACCGCCGACGGCAGCGGCAACTGGAGCTTCACCCCGTCCACGCCGCTGGCGGATGGAACCGTGGTCAACGCCACC GCTACCGACCCGGCCGGCAATACCGGCGGCCAGGGCAGCACTACCGTGGACGCCATCGCGCCGGCCACGCCGACCGTCAACCTGAGCAATGGCAGCAGCC TCAGCGGCACTGCGGAACCGGGCAGCACGGTGATCCTCACCGACGGCAACGGCAATCCGATCGCCGAGGTCACCGCCGACGGCAGCGGCAACTGGACCTA CACCCCGTCCACGCCGATCGCCAACGGTACTGTGGTCAACGTGGTGGCCCAGGACGCCGCCGGTAACAGCAGCCCGCCGGCGACGGTGACCGTCGATTCC AGCGCGCCGCCGGCGCCGGTGATCAACCCGAGCAACGGCGTCGTCATCAGCGGCACCGCCGAGGCCGGTGCCACGGTGACCCTCACCGATGCCGGCGGCA ACCCGATAGGGCAGGTCACCGCCGACGGCAGCGGCAACTGGAGCTTCACGCCGGGCACCCCGCTGGCCAACGGCACGGTGATCGTCGCCACGGCCACCGA CCCGACCGGCAATACCGGCCCGCAGGCCGCCACCACGGTGGACGCGGTGGCGCCGCCGGCGCCGGTGATCGATCCGAGCAACGGCACGACCATCAGCGGC ACCGCGGAGGCCGGGGCCAAGGTGATCCTCACCGACGGCAACGGCAACCCGATCGGCGAAACCACCGCCGACGGCAGCGGCAACTGGACCTTCACGCCCG CCACGCCGCTGGCCAACGGCACGGTGGTCAACGCCGTGGCCCAGGACCCTGCGGGCAATACCGGCCCGCAGGGCAGCACTACCGTGGACGCGGTGGCGCC GAACACGCCTGTGGTCAATCCGAGCAACGGTAACCTGCTCAACGGTACCGCCGAGCCGGGCAGCACCGTGACCTTGACCGACGGCAACGGCAACCCGATC GGCCAGACCACCGCCGATGGCAGCGGCAACTGGAGCTTCACGCCCGGCTCGCAACTGCCCAACGGCACCGTGGTCAACGTGACCGCGAGCGACGCCGCCG GCAATACCAGCCTTCCCGCTACCACGACGGTGGATTCCTCGCTGCCGTCGATCCCGCAGGTGGATCCGAGCAACGGTTCGGTGATCAGCGGCACCGCGGA CGCCGGCAACACCATCATCATCACCGATGGCAACGGCAACCCGATTGGCCAGGTCACCGCCGACGGCAGCGGCAACTGGTCCTTCACTCCAGGCATCCCG CTGCCGGATGGCACGGTTGTCAACGTGGTGGCGCGCAGCCCAAGCAATGTCGACAGTGCGCCGGCGGTGATCACTGTGGATGGCGTGGCCCCGGCGGCGC CGGTGATCGATCCGAGCAACGGCACCGAGATAAGCGGTACCGCGGAGGCCGGCGCGACGGTGATCCTCACCGATGGCGGCGGCAACCCGATCGGCCAGGC CACCGCCGACGGCAGCGGCAACTGGACGTTCACCCCGGGCACCCCGCTGGCCAACGGCACCGTGATCAACGCCGTGGCCCAGGACCCGGCCGGCAACACC AGCGGTCCGGCCAGCGTCACCGTCGATGCCATCGCCCCGCCGGCGCCGGTGATCAATCCGAGCAATGGAGTCGTCATCAGCGGTACGGCGGAAGCCGGGG CCACGGTGATCCTCACCGACGGCAACGGCAACCCGATCGGCCAGGTCACCGCCGACGGCAGCGGCAACTGGGCCTTCACGCCCGCTACGCCGTTGGCCAA TGGCACGGTGATCAATGCGCTGGCCCAGGACGCCGCCGGCAACAACAGCAGTCCCACCAGCGCCACCGTCGACTCGCTGGCGCCAGCAGCCCCGGTGATC GATCCGAGCAACGGTAGCGTGATCGCCGGTACCGCCGAGGCTGGTGCCACGGTGATCCTCACCGACGGCAACGGCAACCCGATCGGCCAGGTCACCGCCG ATGGCAGCGGCAACTGGAGCTTCACGCCCGGCACGCCGCTGTCCAATGGCACGGTGGTCAATGCGGTGGCCCAGGACGCTGCCGGCAACACCAGCGG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
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Amino Acid Sequence |
>glycoprotein
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
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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