Pseudomonas aeruginosa 3575, AJ62_03606 (groEL)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3575 adTyh-supercont1.11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCTTATGTAACGGTCACCGCAAGGTCCCTGCCACAAGGGCAGGCTGTCTTACGCGGCTCGCGCGTCGAGTCGCAACCCGGCAACGCCGGCTTCAACAA AACCCGCCGGACTTCGATCCGGCCGTTGGAAACCACTGTTTGGGAGAGTTACGACTATGAAGCTTCGTCCTCTGCATGATCGCGTCGTTATCCGTCGCAG CGAGGAAGAGACCAAGACCGCAGGCGGCATCGTGCTGCCGGGTTCCGCCGCCGAGAAGCCGAACCGCGGTGAAGTGGTAGCCGTAGGTACCGGTCGTGTA CTGGACAACGGCGAAGTGCGCGCTCTGGCAGTGAAGGTGGGCGACAAGGTGGTCTTCGGGCCTTACTCCGGCAGCAACGCCATCAAGGTCGATGGCGAGG AACTGCTGGTGATGGGCGAGTCCGAAATCCTCGCCGTCCTGGAAGACTGATCGGTCTCACCACTCCGTTTTCACCGAATTCGATTTAGAGGAAAGAGAAC
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| DNA Sequence for Gene |
>AJ62_03606
|groEL
ATGGCTGCCAAAGAAGTTAAGTTCGGCGATTCCGCTCGCAAGAAAATGCTGGTCGGCGTGAACGTGCTGGCCGATGCCGTCAAGGCCACCCTCGGCCCGA AAGGCCGCAACGTGGTTCTGGACAAGTCCTTCGGCGCTCCGACCATCACCAAGGACGGCGTTTCCGTCGCCAAGGAAATCGAGCTGAAAGACAAGTTCGA GAACATGGGCGCGCAACTGGTGAAAGACGTTGCCTCCAAGGCCAACGACGCTGCCGGTGACGGCACCACCACCGCGACCGTCCTGGCCCAGGCCATCGTC AACGAAGGCCTGAAGGCCGTTGCCGCCGGCATGAACCCGATGGACCTGAAGCGTGGCATCGACAAGGCCACCGTGGCCATCGTCGCCCAGCTGAAAGAGC TGGCCAAGCCCTGCGCCGACACCAAGGCCATAGCCCAGGTAGGCACCATCTCCGCCAACTCCGACGAGTCCATCGGCCAGATCATTGCCGAAGCCATGGA AAAAGTCGGTAAAGAAGGCGTGATCACCGTCGAGGAAGGCTCGGGCCTGGAAAACGAACTGTCCGTCGTCGAAGGCATGCAGTTCGATCGCGGCTACCTG TCCCCCTACTTCGTGAACAAGCCGGACACCATGGCTGCCGAGCTGGATAGCCCGCTGCTGCTGCTGGTCGACAAGAAGATCTCCAACATCCGCGAAATGC TGCCGGTGCTGGAAGCCGTCGCCAAGGCCGGCCGTCCGCTGCTGATCGTCGCCGAGGACGTCGAGGGCGAAGCCCTGGCCACCCTGGTGGTGAACAACAT GCGTGGCATCGTCAAGGTCGCGGCTGTCAAGGCTCCGGGCTTCGGCGATCGCCGCAAGGCCATGCTGCAGGACATCGCCATCCTCACCGGCGGTACCGTG ATCAGCGAAGAAGTCGGCCTGAGCCTGGAAGGCGCTACCCTGGAGCACCTGGGCAACGCCAAGCGCGTCGTGATCAACAAGGAAAACACCACCATCATCG ATGGCGCCGGTGTGCAGGCTGATATCGAAGCCCGCGTCCTGCAGATCCGCAAGCAGATCGAGGAAACCACTTCCGACTACGACCGCGAGAAGCTGCAAGA GCGCCTGGCCAAGCTGGCCGGCGGTGTTGCCGTGATCAAGGTAGGCGCTGCCACCGAAGTCGAGATGAAAGAGAAGAAAGCCCGCGTCGAAGACGCCCTG CACGCTACCCGTGCAGCGGTGGAAGAGGGCGTGGTTCCCGGCGGCGGCGTAGCCCTGGTTCGTGCCCTGCAAGCCATCGAAGGCCTGAAGGGTGACAACG AGGAGCAGAACGTCGGTATCGCCCTGCTGCGTCGCGCCGTCGAATCGCCGCTGCGCCAGATCGTGGCCAACGCCGGCGACGAGCCGAGCGTAGTGGTCGA CAAGGTCAAGCAGGGTTCCGGCAACTACGGCTTCAACGCTGCTACCGGCGTGTATGGCGACATGATCGAGATGGGCATCCTGGACCCGGCCAAGGTCACT CGTTCCGCTCTGCAGGCTGCGGCCTCCATCGGCGGTCTGATGATCACCACCGAAGCCATGGTTGCCGAGATCGTGGAAGACAAGCCGGCCATGGGCGGCA TGCCTGACATGGGCGGCATGGGCGGCATGGGCGGCATGATGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGACCGGCCCCTGTGGTTGGAAAAGCCCCGCTTCGGCGGGGCTTTTTTATTCCTCAGTGCGGGCAGTCCTGGCGGTAGCCCGGCAGCTCCCTTGCCGC CGGTTCGCAGGCCAGGCGCAGTGCCTGCTTCAGGTCGTCGGGCAGAGTGGCGCGGCTGATCGGCCGCCAGTGCATGCGTTCGCCGAAATAGCGCGCCCAG TGGAATTCGATGAAATAGCTCTGCCGATCCTTGTCGAAGGCGTTCTCGTCCTCGGCGTAGCCGGCCAGGGCGCGGTAGGGGTCGTCGCCAAGCCCGGCGA GAGCGTCCGGCAGGGCCTCGGGCGGGATCTCCGCGCCACGCGCATCGTGCAGCCAGACCCAGTGGTTTTCCTGCATCTTCTCCCAGAAGTCGCTGGCCTG GGGTAGCCGGCCGATCACCTTCACCGGCACGCCCTGTTTCGGGTCCAGGCGCCAGAGCGCGCTACTCAGGTGATGGCGATCGGTGAGGTAGAAGCGGCCG
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| Amino Acid Sequence |
>molecular chaperone GroEL
MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLDKSFGAPTITKDGVSVAKEIELKDKFENMGAQLVKDVASKANDAAGDGTTTATVLAQAIV NEGLKAVAAGMNPMDLKRGIDKATVAIVAQLKELAKPCADTKAIAQVGTISANSDESIGQIIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYL SPYFVNKPDTMAAELDSPLLLLVDKKISNIREMLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV ISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGVVPGGGVALVRALQAIEGLKGDNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDKVKQGSGNYGFNAATGVYGDMIEMGILDPAKVT RSALQAAASIGGLMITTEAMVAEIVEDKPAMGGMPDMGGMGGMGGMM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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