Pseudomonas aeruginosa 3575, AJ62_02916
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3575 adTyh-supercont1.8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGGCCCGATGCTGCTCAAGGTGAGCACGCCGATTTCCGCCGCGGACACCGGCGGCAGCCTGCACGACCGGCTCGCCGCGCTCGGCCCGAAAGCGGTGG TCGAAGCCATCGCCGGCCTGGCCGCCGGCACCCTGCATGGCGAGATCCAGGACGACGCCCTGGCCACCTACGCGCACAAGCTGAACAAGGACGAGGCACG CCTCGACTGGAGCCGTCCGGCCGTCGAACTGGAGCGCCAGGTCCGCGCCTTCACCCCCTGGCCGGTCTGCCACACCAGCCTCGCCGATGCGCCGCTGAAA GTCCTCGGCGCCAGCCTGGGGCAGGGCAGCGGGGCGCCCGGAACCATCCTCGAGGCCAGCCGCGACGGCCTGCTGGTCGCCTGCGGCGAAGGCGCCCTGC GCCTGACCTGCCTGCAAGTGCCGGGCGGCAAGCCACTGGCCTTCGCCGAGCTCTACAACAGCCGTCGCGAGCAATTCGCCACCGGCCAGGTGCTCGGCCA
|
|
| DNA Sequence for Gene |
>AJ62_02916
ATGAACCCGCGTCTCGCCGCCTGCCAGGCACTGGCCGCGGTGCTCGCCGGACGCGCCTCGCTGTCTGGCGCGTTGCCGCCGCAACTGGACAAGGTCGCCC CGCGCGATCGCGGCCTGACCCAGGAGCTGGCCTTCGGCGCGGCGCGCTGGCAACCGCGCCTGCAGGCCCTGGCCGCGCGCCTGTTGCAGAAGCCGTTCAA GGCCGCCGACACCGATATCCACGCCCTGCTGCTGATCGGCCTCTACCAGTTGCTCTACACGCGGATTCCGCCGCACGCCGCGATCGGCGAGACCGTCGGC TGCGCCGACAAGCTGAAGAAGGGCTGGGCCAAGGGCGTGCTCAACGCCGTGCTGCGCCGCGCGCAGCGCGAAGGCGAGACGCTGCTGGCCGAGGTCGACC GCGATCCCTCAGCGCGCCTGGGACATCCGCGCTGGCTGCTGAAAGCGCTCAAGCAGGCCTGGCCGGAGCAGCTCCACGCGCTCTGCGCAGCGAACAACGC ACACCCGCCGATGACCTTGCGGGTCAATCGGCGCCGCGGCGAGCGCGATGCCTACCTGGCCGAACTCGCCGAAGCCGGAATCGAGGCCCGCGCCTGCGAC TACAGCCGCGACGGCATCCAGCTCGCCGCGCCGCGCGACGTGCGCGAACTACCGGGCTTCGCGGAGGGCCGCGTCAGCGTCCAGGACGAAGCCGCGCAAC TGGCCGCCGAGCTGCTCGAAAGCGCGCCCGGCCAGCGTGTCCTCGACGCCTGCTGTGCGCCTGGCGGCAAGACCTGCCACCTGCTGGAAACCCAGCCGGA ACTGGCCGAAGTGGTCGCCGTCGACCTCGAGGAGAGCCGCCTGGTAAGGGTTCGGGAAAACCTCCAGCGGCTCGGCCTGCAAGCCAGCCTGGTCGCCGCC GACGCCAGGGCCACCGGGGAGTGGTGGGACGGCAAGCCGTTCCAGCGCATCCTCCTCGACGCGCCGTGCTCGGCCACCGGGGTGATCCGCCGCCACCCGG ACATCAAGCTGGCGCGCAAGCCGGAAGACATCGCCGCCCTGGCGCACCTGCAAGGTGAATTGCTCGACGCACTGTGGCCTACCCTGGAAGTCGGCGGCGT GCTGCTCTATGCCACCTGTTCGGTGATGCCGGCAGAAAACAGCGACAGCATCGCCGCCTTCCTTGCCCGTACGCCCGGCGCCCGCGAACTGGACCTTCCC GGCCCCTGGGGCATGAAACAGCCCCACGGCCGCCAGTTATTGCCGCAGGTGGAAGGCCACGATGGCTTCTACTATGCCAAGCTGATCAAGATATCCGCCC GTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGAAACCTGACGAGCCGTTCCTGCCATGAAAATCATCATCCTAGGTGCCGGCCAGGTCGGCGGCACACTGGCCGAGCACCTGGCCAGCGAAGCCAACGA CATCACCGTGGTCGACACCGACGGCGACCGCCTGCGCGACCTCGGCGACCGCCTCGACATCCGCACCGTGCAAGGCAAGGCCTCGTTCCCCACGGTGCTG CGCCAGGCCGGCGCCGACGACGCCGACATGCTGGTGGCGGTGACCAATAGCGACGAGACCAACATGGTCGCCTGCCAGGTCGCCTACACCCTGTTCAATA CCCCGACCAAGATCGCCCGCGTCCGCGAGCCGGCCTACCTGACCCGTACCGGCCTGTTCGACAACGAGGCGATCCCGGTGGACGTGCTGATCAGTCCGGA GCAGGTGGTCACCAACTACATCAAGCGCCTGATCGAACATCCCGGCGCGTTGCAGGTGATCGACTTCGCCGAAGGCAAGGCGCAACTGGTCGGCATCAAG
|
|
| Amino Acid Sequence |
>16S rRNA methyltransferase
MNPRLAACQALAAVLAGRASLSGALPPQLDKVAPRDRGLTQELAFGAARWQPRLQALAARLLQKPFKAADTDIHALLLIGLYQLLYTRIPPHAAIGETVG CADKLKKGWAKGVLNAVLRRAQREGETLLAEVDRDPSARLGHPRWLLKALKQAWPEQLHALCAANNAHPPMTLRVNRRRGERDAYLAELAEAGIEARACD YSRDGIQLAAPRDVRELPGFAEGRVSVQDEAAQLAAELLESAPGQRVLDACCAPGGKTCHLLETQPELAEVVAVDLEESRLVRVRENLQRLGLQASLVAA DARATGEWWDGKPFQRILLDAPCSATGVIRRHPDIKLARKPEDIAALAHLQGELLDALWPTLEVGGVLLYATCSVMPAENSDSIAAFLARTPGARELDLP GPWGMKQPHGRQLLPQVEGHDGFYYAKLIKISAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|