Pseudomonas aeruginosa 3575, AJ62_02022
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3575 adTyh-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCTCACCGCGATCCGCAGGGTCGCCGGCGGCGGACGCTACATCGACCCGGACCTTGCCGATCGGATGGTCTTCGAGGTCGGCCTGACCGATTCGCGTC CGCCCCATGCGCTGCTCTCCGAGCGCGAGTTCTCGGTGTTCGAGCGGCTGGTGCAGGGCGCCAACGTCAACGAGATCGCCCAGCAACTGGCGGTCAGCAA CAAGACCATCAGTACCCACAAGGCACGCCTGATGCAGAAGCTCAACGCGCATTCGGTAGCCGACCTGGTGCGCTACGCGATGGAGCACCGCCTGCTCTGA CAGGGGCGTTCGCCCAGGTTTTGCTCGCGGCTTGTGCGCCAGGTCCGGTTTTCGCGATCTGCTGTCTACCTGGCTTCCGCGCGGCAGGGAATGATGCTTG CCGGCCAACACGATAAGGAGAAGAAACGATGTTGCCAGCCATGAGGACGGGCCTGTTGTGCGCCCTTCTCGGAGTTACCGCGCCCGCCTGGGCGGAATAC
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| DNA Sequence for Gene |
>AJ62_02022
GTGACCGTGATTTCCTTCGGCGGCGCCAACAAGGAAGCCCAGGAAACCGCGTTCTACAAACCCTTCAAGAGCGCCACCGGCAATCGCGTGGTGCATGGCT CCTACAATGGCGACCTGGCCAAGCTCAAGCGCATGGTGGAGATCAGCCACGTCTCCTGGGACGTGGTGGAAGTCGAGGCGCCGGAGCTGGCGCGCGGTTG CGAGGAAGGTCTGTTCGAGAAGCTGGACATGGCGAAGGTCGGCGATCCCGCGGATTTCGTTCCCGGCGCGGTGCAGCCCTGCGGAGTCGGCATCTTCGTC TGGACCACGCTGCTTGCCTACAACCCCGGCAAGGTTGCGGGCAGCCCGCAGGGCTGGGCGGATTTCTGGGACGTGAAGAAGTTTCCCGGCAAGCGCGGCC TGCGCTGGGGCGCCAAGTACAGCCTGGAGTTCGCCCTGATGGCCGATGGCGTGGCGCCGAAGGACGTCTACCAGACGCTGGCGACGCCCGCCGGCGTCGA GCGGGCATTCCGCAAGCTCGACGAGCTGAAGCCCTATATCCATTGGTGGAAGTCCGGGCAGGACCCTGTGCGCGACCTGGCCGATGGCACGGTGGTGATG AGTTCGGCCTACAACGGGCGGATCGCCGCGGCGCAGGCCGAGAAGCAGCGCCTGGCAATGGTCTGGAGCGGCGGCGTCTACGATTTCGACTTCTGGGCGC TGCCGGTCGGGGTTTGGAAGAAGCAGTTGGCCGAGGAGTTCATCCGTTTCGCCAGCCAGCCGGAGCAGCAGAAGGCTTTCGCCGAGAACATCGCCTACGG CCCGGCCAACCGCAAGGCGGTAGGCCTGCTCGATCCGCAAGTGGCTGCCAACCTGCCGACCGCGCCGCAGAACATGCAGAACGCGGTGGGTATGAACGTG GCCTTCTGGGCGGAGCACGGCGAGGCCCTGGAGCAGCGTTTCCAGAACTGGGCCAAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGGCCGTTGCGCGCCAGCCGGAGAGCGCTGGCGCGCAAACCTTTGCTCTTCTCGAAAGCTCCTTCCCAGAGCGGTTCGGCCCATTCCGGGATGCATCT TTTTTGTAGGGCGATTCCTACAAAGAGCTTTCCTTTCCCCTGATAGAAAACTCTCTTGCCGGCCGATTTGCGTCCTGCGCCGGGTTCTCTAGGCTGTTCG CACAGCATCCATAAAACGAACAAAGGTGCGGTTATGGCCGAGACTCAAGGCGGCGATGTGCTGGTCAGCTTCCGTGGCGTGCAGAAGAGCTACGACGGCG AGACCCTCATCGTGAAGGATCTCAACCTGGACATTCGCAAGGGCGAATTCCTCACCCTGCTCGGCCCCTCCGGGTCCGGCAAGACCACCAGCCTGATGAT GCTGGCCGGTTTTGAAACCCCCACCGCCGGCGAAATCCTCCTGGCCGGTCGCTCGATCAACAATGTCCCTCCGCACAAGCGCGACATCGGCATGGTGTTC
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| Amino Acid Sequence |
>spermidine/putrescine ABC transporter substrate-binding protein
MTVISFGGANKEAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMAKVGDPADFVPGAVQPCGVGIFV WTTLLAYNPGKVAGSPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYIHWWKSGQDPVRDLADGTVVM SSAYNGRIAAAQAEKQRLAMVWSGGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNV AFWAEHGEALEQRFQNWAKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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