Pseudomonas aeruginosa 3575, AJ62_01162
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3575 adTyh-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCGCTTCATGGTGGTGGCGCCGAGTTCGACCATCGACATGAACCTGGAGAGCGGCGAGGACATCCCGATCGAAGAGCGCGACGGTCGCGAACTGCTGG AAATCGGCGGGCGACGGGTGGCGGCCGAGGTCGATGCCTACAATCCGGTATTCGACGTGACCCCGGCGGACCTTATCGATGCCATCGTGACCGAGCGTGG CGTCGTCGAGCGTCCCGACGCCGAGCGCATGGCCGCCCTGATGAGCCGCAAGCGCCTGCATTGAACGAGGCGACTGGAGGTCGTCCCCGCCAGGGCCTTT GCCTTGGGCTGGGGCGTGGGCTGTGGTAAGCTCCGACGGTTATTCGAGCGCCCCGCGGAGGGGCCTCGAGAGTGCGCGAATCCTTGACTCAAGTCGTTGA TTTGTAGTGAGTTGGCGCTGCTCGGGCATGCGCCGACCTACTTCGTTTGCCTCAGGATCGAGGCGGCGAAGTTCCACCAGAAAAAGGAACCAGGCTTCTC
|
|
| DNA Sequence for Gene |
>AJ62_01162
ATGGGCGAACTGGCCAAAGAAATTCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTATCTCGACTACGCGATGAGCGTGATCGTCGGGCGGGCCC TGCCGGATGCACGTGACGGCCTGAAGCCGGTGCACCGCCGTGTGCTTTATGCCATGAGCGAGCTGGGCAACGACTGGAACAAGCCCTACAAGAAATCCGC CCGTGTGGTCGGCGACGTGATCGGTAAGTACCACCCGCACGGCGACACCGCGGTCTACGACACCATCGTGCGCATGGCGCAGCCGTTCTCGCTGCGCTAC ATGCTGGTAGACGGCCAGGGCAACTTCGGTTCGGTGGACGGCGACAACGCCGCAGCCATGCGATACACCGAAGTGCGCATGGCCAAGCTGGCCCATGAAC TGCTGGCGGACCTGGAAAAGGAAACCGTCGACTGGGTGCCCAACTACGATGGCACCGAGCAGATCCCGGCGGTCATGCCGACCAAGATTCCCAACCTGCT GGTCAACGGTTCCAGCGGTATCGCCGTGGGCATGGCGACCAACATCCCGCCGCACAACCTCGGCGAAGTGATCGACGGCTGCCTGGCGCTGATGGACAAC CCCGACCTGACCGTCGATGAGCTGATGCAGTACATCCCCGGTCCGGACTTCCCCACCGCCGGCATCATCAACGGCCGCGCCGGGATCATCGAGGCCTACC GCACCGGTCGCGGGCGCATCTACATCCGTGCCCGCGCCGTCGTCGAGGAGATGGAGAAGGGCGGCGGTCGCGAGCAGATCATCATCACCGAGCTGCCGTA CCAGTTGAACAAGGCGCGGTTGATCGAGAAGATCGCCGAGCTGGTGAAAGAGAAGAAGATCGAGGGTATTTCCGAGCTGCGCGACGAGTCCGACAAGGAC GGCATGCGCGTGGTCATCGAGCTGCGTCGCGGCGAGGTGGGCGAGGTGGTCCTCAACAACCTCTACGCCCAGACCCAGCTGCAGAGCGTGTTCGGCATCA ACGTGGTGGCCCTGGTCGACGGCCAGCCGCGCACGCTGAACCTGAAGGACATGCTCGAGGTGTTCGTCCGCCACCGCCGCGAAGTGGTGACCCGGCGTAC CGTCTACGAGCTGCGCAAGGCCCGCGAGCGCGGGCACATCCTGGAAGGCCAGGCGGTCGCCCTGTCGAACATCGACCCGGTGATCGAGCTGATCAAGAGT TCGCCGACCCCGGCCGAGGCCAAGGAACGCCTGATCGCCACTGCCTGGGAGTCCAGCGCGGTGGAAGCGATGGTCGAGCGTGCCGGCGCCGACGCCTGTC GCCCGGAAGACCTGGATCCGCAGTACGGCCTGCGCGACGGCAAGTACTACCTGTCGCCGGAACAGGCCCAGGCGATCCTCGAGCTGCGCCTGCATCGCCT GACCGGCCTGGAGCACGAGAAGCTGCTCTCCGAATACCAGGAAATCCTCAACCTGATCGGCGAGTTGATCCGCATCCTGACCAACCCGGCGCGCCTGATG GAGGTGATCCGTGAGGAGCTGGAAGCGGTCAAGGCCGAATTCGGCGATGCTCGCCGCACCGAGATCGTGGCTTCCCAGGTCGACCTGACCATCGCCGACC TGATCACCGAGGAAGACCGCGTGGTGACCATCTCCCACGGCGGCTACGCCAAGTCCCAGCCGCTGGCCGCCTACCAGGCGCAGCGTCGCGGCGGCAAAGG CAAGTCCGCCACCGGGATGAAGGACGAGGACTACATCGAACACCTGCTGGTGGCCAACAGCCATGCGACCCTCCTGCTGTTCTCCAGCAAGGGCAAGGTG TACTGGCTGCGTACCTTCGAGATTCCGGAAGCCTCGCGTACCGCGCGTGGCCGGCCGTTGGTGAACCTGCTGCCGCTGGACGAGGGCGAGCGGATCACCG CGATGTTGCAGATCGACCTGGAGGCGCTGCAGCAGAACGGCGGCGCCGATGACGACCTCGACGAAGCCGAAGGAGCGGTGCTCGAGGGCGAGGTGGTCGA GGCCGCCGAGGTCGAGGAAGTCGAGGGCGAGACCGCCGAGCTGGTGGCCGAGCCGACCGGCGCCTACATCTTCATGGCCACCGCCTTCGGTACCGTGAAG AAGACCCCGCTGGTGCAGTTCAGCCGTCCGCGCAGCAGCGGCCTGATCGCGCTCAAGCTGGAAGAGGGCGACACCCTGATCGCCGCCGCGATCACCGATG GCGCCAAGGAAGTCATGCTGTTCTCCAGCGCCGGCAAGGTGATCCGCTTCGCCGAGAGCGTGGTGCGCATCATGGGCCGCAACGCCCGCGGCGTACGTGG CATGCGCCTGGGCAAGGGGCAGCAGCTGATCTCCATGCTGATTCCGGAGTCCGGGGCGCAGATCCTCACCGCCTCCGAGCGCGGCTTCGGCAAGCGTACC CCGCTGAGCAAGTTCCCGCGTCGCGGCCGCGGCGGCCAGGGGGTGATCGCCATGGTCACCAACGAGCGCAACGGCGCGCTGATCGCCGCGGTACAGGTCC AGGAAGGCGAGGAGATCATGCTGATTTCCGACCAGGGCACCCTGGTGCGGACGCGTGTCGACGAAGTCTCCCTGTCCGGCCGCAATACCCAGGGCGTAAC CCTGATCAAGCTCGCCAGCGACGAGGTACTGGTCGGTCTGGAGCGTGTCCAGGAGCCGTCGGGCGGAGATGACGAGGACCTGCCCGAGGGCGAGGAAGCT GCCGAATCTCTGGGCGAGTCGGCCGAGTCCGAGTCCGAGCCCGCGGCGGAAGCGGAAGGCAACGAAGAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCTCGGGGCGGGCGCCTGCGCCCGCCCGGCCGATGACCTCGGCGGATAACTCACGGCTATCCGCCCTACCTATAGCGAGAGTGGATGTGAGCAAGCGAG CCTTCAATTTCTGCGCCGGTCCCGCGGCGCTTCCCGACGCAGTTCTGCAACGTGCCCAGGCCGAGCTTCTCGACTGGCGGGGCAAGGGCCTTTCGGTCAT GGAAATGAGCCACCGTAGTGATGACTACGTGGCCATCGCCAGCAAGGCCGAGCAGGACCTGCGCGACCTGCTCGACATTCCCTCGGACTACAAGGTGCTG TTCCTGCAGGGCGGCGCCAGCCAGCAGTTCGCCGAGATTCCGCTGAACCTGCTGCCCGAAGATGGCGTCGCCGACTATATCGATACCGGTATCTGGTCGA AGAAGGCCATCGAGGAGGCTCGTCGCTATGGCACCGTGAATGTCGCGGCCAGCGCCAAGGAGTACGACTACTTCGCCATTCCGGGTCAGAACGAGTGGAC
|
|
| Amino Acid Sequence |
>DNA gyrase subunit A
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY MLVDGQGNFGSVDGDNAAAMRYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALMDN PDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRIYIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRREVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKS SPTPAEAKERLIATAWESSAVEAMVERAGADACRPEDLDPQYGLRDGKYYLSPEQAQAILELRLHRLTGLEHEKLLSEYQEILNLIGELIRILTNPARLM EVIREELEAVKAEFGDARRTEIVASQVDLTIADLITEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFSSKGKV YWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDEAEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVK KTPLVQFSRPRSSGLIALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQLISMLIPESGAQILTASERGFGKRT PLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQEGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERVQEPSGGDDEDLPEGEEA AESLGESAESESEPAAEAEGNEE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|