Pseudomonas aeruginosa 3575, AJ62_00845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3575 adTyh-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGACCTGGAACTGGTGGCGGCGAACTTCGTTTCCGGCGAGACGCCGGCGCGCCGCCGCGACTGCGCGACGACGGATTGCCCGGCGCCGCTGCACACCCT GTCGAAGACCGATACGGAGGAAAACCGGGGCGCGCTCAATTGAGACCGCGAAGGACGTGCAGGCAATTGTTCGCCTGGCGTGAAGTCGATGTCCCGGGCG GGTCGACAGAGGTCGAACAATACGCATGGAATTGTTTTTTCAATAAGGCGCTATTTATATGAAACGGTTTTTATAATATTCCAGTGTCTTCGGTAGTTTA TCTTTCCTGCATGATTTCATATATGCGGAATTCGTTCGTGCATATGCTTTAAGTGCAGCTTAATTTTTTCGTGAAACCTGTGGACATTGGAAAATGAGCT GTGTCAGTTTGGACTTCGGCCTGATCTGGCCGATAACTGCAATTATCCATCCGATAATTGTATCCGAGTTATTTCCTTTACAACTTAAAGGGATATGACA
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| DNA Sequence for Gene |
>AJ62_00845
ATGTCCAGCAATTCTCTTGCATTGAAAGGTCGTAGCGATGCGTATACCCAGGTAGACAACTTCCTGCATGCCTATGCGCGGGGCGGGGACGAATTGGTCA ATGGCCATCCGTCCTATACCGTCGACCAGGCGGCGGAGCAGATCCTCCGCGAACAGGCGTCTTGGCAGAAAGCGCCGGGCGACTCGGTGCTGACCCTGTC CTATTCGTTCCTGACCAAGCCGAACGACTTCTTCAATACGCCGTGGAAGTATGTCAGCGATATCTACTCGCTGGGCAAGTTCAGCGCCTTCTCCGCGCAG CAGCAGGCCCAGGCCAAGTTGTCGCTGCAATCCTGGGCGGACGTCACCAAGATCCACTTCGTCGACGCCGGCCAGGGCGATCAGGGCGACCTGACCTTCG GCAACTTCAGCAGTAGTGTCGGCGGTGCGGCGTTCGCCTTCCTGCCGGATGTACCGGATGCGCTCAAGGGGCAATCCTGGTACCTGATCAACAGCAGCTA CAGCGCCAACGTCAATCCGGCCAACGGCAACTACGGACGCCAGACCCTGACCCACGAGATCGGCCATACCCTGGGCCTGAGCCACCCCGGCGACTACAAC GCCGGCGAGGGCGATCCCACCTACGCCGACGCTACCTACGCCGAGGACACCCGCGCCTATTCGGTGATGAGCTACTGGGAAGAGCAGAACACCGGCCAGG ACTTCAAGGGCGCCTATTCCTCGGCACCGCTGCTGGACGACATCGCGGCGATCCAGAAGCTCTACGGGGCCAACCTGACCACCCGCACCGGCGACACGGT GTACGGCTTCAACTCCAACACCGAGCGCGACTTCTACAGCGCCACCTCGTCCAGTTCCAAGCTGGTGTTCTCGGTGTGGGACGCCGGCGGCAACGACACC CTGGACTTCTCCGGCTTCAGCCAGAACCAGAAGATCAACCTCAACGAGAAGGCGCTGTCCGATGTCGGCGGGTTGAAGGGCAATGTGTCGATCGCTGCCG GGGTCACCGTGGAAAACGCCATCGGCGGCTCGGGTAGCGACCTGTTGATCGGCAACGACGTGGCCAACGTGCTCAAGGGCGGCGCCGGCAACGACATCCT CTACGGCGGCCTCGGCGCGGACCAGCTGTGGGGTGGCGCGGGAGCCGACACCTTCGTCTACGGCGATATCGCCGAGTCCTCCGCGGCGGCGCCGGATACC CTGCGCGACTTCGTCAGCGGCCAGGACAAGATCGACCTGTCCGGGCTGGACGCCTTCGTCAACGGCGGGCTGGTGCTGCAATACGTCGACGCCTTCGCCG GCAAGGCCGGCCAGGCGATCCTGTCCTACGACGCGGCGAGCAAGGCCGGCAGCCTGGCGATCGACTTCAGCGGGGACGCCCATGCCGATTTCGCGATCAA TCTGATCGGCCAGGCGACCCAGGCCGACATCGTCGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCGCTGACACGGGCGCGGTTCGGTGCGGCGGTACGAACCGCGGCCCTTCGGCCGGCCGGGCACTGTTCGAATTGATAGGTGTCTTCCACAGGAGCGAAG TTGTGAACTGTGGCGCGCCCGTGGGCCTGCGACCCGGCGGACGAACGGAGGTCCGCGGCGCCTGGCGCGCGCTGGCGTTCGAAGCGAGGATGGCGGGCGG CGTTCGCCGTGTTATCCGATGTTCCAGGCTTGAAGGAGATCTCTCGATGTCGGCAAGCGCGAAGCTCTCCAGGATGGTTTGCTTGCTCTGCGGTTTTTTC AGCACAGGTATCAGTATGGCCAGCAGTCTGATTCTTCTCAGCGCTTCCGATCTCGCCGGGCAATGGACCCTGCAGCAGGACGAGGCGCCCGCGATCTGCC ACCTGGAGCTGCGCGACAGCGAAGTGGCGGAAGCCAGTGGCTACGACCTGGGCGGCGATACCGCCTGCCTCACGCGCTGGCTGCCCAGCGAGCCGCGCGC
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| Amino Acid Sequence |
>alkaline metalloproteinase
MSSNSLALKGRSDAYTQVDNFLHAYARGGDELVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGKFSAFSAQ QQAQAKLSLQSWADVTKIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYN AGEGDPTYADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDT LDFSGFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGADTFVYGDIAESSAAAPDT LRDFVSGQDKIDLSGLDAFVNGGLVLQYVDAFAGKAGQAILSYDAASKAGSLAIDFSGDAHADFAINLIGQATQADIVV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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