Pseudomonas aeruginosa 3575, AJ62_00054
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3575 adTyh-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTCCTTTTAAAACACGGGAAGCGATTCCCGGCCTGTTCACTCAGAGGAAGCCCATCATGGCACTGAGCGTTGAAGAAAAAGCGCAGATCGTTAACGAAT ACAAGCAAGCTGAAGGCGACACCGGTTCCCCGGAAGTGCAGGTAGCCCTGTTGTCCGCCAACATCAACAAGCTGCAGGATCACTTCAAGGCCAACGGCAA GGATCACCATTCCCGCCGTGGTCTGATCCGTATGGTTAACCAGCGCCGTAAGCTGCTGGACTACCTGAAGGGCAAAGACGTGTCTCGCTACACTGCCCTG ATCGGCCGTCTGGGTCTGCGTCGCTAAGCGACGCCGGTCGGCAGCTTGAAGCAAGGAGCTGGAAGTCTGGCGTCGATACCCGCACACGAGGCGGGTATCG GCGTCGGGCTTCCAGCTTCGCGCTTTCTAGGAATCGATTCGGGTCCGACTCCCGGCATTCCACCGATTTCCCCCAAGGCAACATAGAAGGTAAAGACACC
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| DNA Sequence for Gene |
>AJ62_00054
GTGAACCCGGTAACCAAGCAATTCCAGTTCGGTCAGTCGACCGTCACTCTCGAGACCGGCCGTATCGCTCGCCAGGCCACCGGCGCCGTACTGGTCACCA TGGACGACGTCAGCGTGCTGGTCACCGTGGTCGGCGCCAAGTCGCCGGCCGAAGGCCGCGACTTCTTCCCGCTGTCCGTGCACTACCAGGAAAAGACCTA CGCCGCAGGCCGTATCCCCGGTGGTTTCTTCAAGCGTGAAGGACGTCCTTCCGAGAAGGAAACCCTGACCTCGCGCCTGATCGACCGTCCGATCCGTCCG CTGTTCCCCGAAGGTTTCATGAATGAAGTGCAGGTCGTCTGCACCGTCGTTTCCACCAACAAGAAGTCCGATCCGGACATCGCCGCGATGATCGGCACCT CCGCCGCCCTGGCGATCTCCGGCATTCCGTTCGCCGGCCCGATCGGCGCCGCCCGCGTCGGTTTCCACCCGGAAATCGGCTACATCCTCAACCCCACCTA CGAGCAACTGCAGAGTTCCAGCCTCGACATGGTCGTGGCCGGTACCGAAGACGCCGTGCTGATGGTGGAGTCCGAGGCCGACGAACTGACCGAAGACCAG ATGCTCGGTGCCGTGCTGTTCGCCCACGACGAGTTCCAGGCGGTGATCCGTGCCGTCAAGGAGCTGGCCGCCGAAGCTGGCAAGCCGGCCTGGGACTGGA AAGCCCCGGCGGAAAACACCGTGCTGGTCAACGCCATCAAGGCAGAGCTGGGCGAAGCGATCTCCCAGGCCTATACCATCACCATCAAGCAGGACCGCTA CAACCGTCTGGGCGAGCTGCGCGACCAGGCCGTGGCCCTGTTCGCCGGCGAGGAAGAGGGCAAGTTCCCGGCTTCCGAGGTCAAGGACGTATTCGGCCTG CTGGAATACCGCACCGTTCGCGAGAACATCGTCAACGGCAAGCCGCGTATCGACGGTCGTGACACCCGTACCGTGCGTCCGCTGCGCATCGAAGTCGGCG TGCTCGGCAAGACCCACGGTTCCGCGCTGTTCACCCGTGGCGAAACCCAGGCCCTGGTCGTCGCGACCCTCGGCACCGCGCGTGATGCCCAACTGCTGGA TACCCTGGAAGGCGAGCGCAAGGACGCCTTCATGCTGCACTACAACTTCCCGCCGTTCTCGGTAGGCGAGTGCGGCCGCATGGGCAGCCCGGGTCGTCGT GAAATCGGCCATGGCCGTCTGGCCCGTCGTGGCGTCGCCGCCATGCTGCCGACCCAGGACGAGTTCCCCTACACCATTCGCGTGGTTTCCGAGATCACCG AGTCCAACGGTTCCAGCTCGATGGCCTCCGTGTGCGGCGCCTCCCTGGCGCTGATGGATGCCGGTGTGCCGGTCAAGGCGCCGGTCGCCGGTATCGCCAT GGGCCTGGTCAAGGAAGGCGAGAAGTTCGCCGTCCTGACCGACATCCTCGGTGACGAAGACCACCTGGGCGACATGGACTTCAAGGTTGCCGGTACCGAC AAGGGCGTCACCGCCCTGCAGATGGACATCAAGATCAACGGTATCACCGAAGAGATCATGGAGATCGCCCTGGGCCAGGCCCTGGAAGCTCGCCTGAACA TCCTCGGCCAGATGAACCAGGTCATCGCCAAGCCTCGCGCCGAGCTGTCTGAGAACGCCCCGACCATGCTGCAGATGAAGATCGACTCGGACAAGATCCG CGACGTCATCGGCAAGGGCGGCGCGACCATCCGTGGTATCTGCGAAGAGACCAAGGCCTCGATCGACATCGAGGACGATGGCAGCGTGAAGATCTACGGC GAAACCAAGGAAGCCGCCGAGGCCGCCAAGCTGCGCGTCCTGGCGATCACCGCGGAAGCCGAGATCGGCAAGATCTACGTCGGCAAGGTGGAGCGCATCG TCGACTTCGGTGCCTTCGTCAACATCCTGCCGGGCAAGGACGGCCTGGTGCATATCTCGCAGATCAGCGACAAGCGCATCGACAAGGTCACCGACGTGCT GCAGGAAGGCCAGGAAGTGAAGGTCCTGGTGCTCGACGTGGACAACCGTGGCCGCATCAAGCTGTCGATCAAGGACGTGGCTGCCGCCGAAGCTTCCGGC GTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGAGTCGTGATCGATGAAAACAGGGCCCTCGGGCCCTGTTTTCGTTTCCGCGACACGCTTCTCGGCGAAGGGGGTGAATCCTTGCATTTTGCAAGCCC TGCCATCGCCAATTCGGCATTCTGCAACCGTCTCGCTTCCGACCTGTTTTTTAACCTATTGTTTTTAAAGGATTTTATTTTAGAGGAAAACTGGCACAGC GCTTGCGATATCTACTATGCAACTGACGCCAGGAATGGCTGCAGTTTTTCGAAATCCATAGGAGAAACCGCAATGAAATTCAGCAAACTCGCTATTGCCG CTGCTACTGCCACTGCTCTGAGCTTCTCGATGGCCAATGCGTTCGCTGCCCAGCCCATCAGCCTGGCGGCCAACGACACTATGCAGAAAACCGAAGAAGC GGTTTCCGATACCTGGATCACCAGCAAGGTGAAATCCAGCCTGATCGCCAACAAGAATGTCAGTGGCGTCGATATCAAGGTCGAGACCAACAAAGGTGTG
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| Amino Acid Sequence |
>polynucleotide phosphorylase/polyadenylase
MNPVTKQFQFGQSTVTLETGRIARQATGAVLVTMDDVSVLVTVVGAKSPAEGRDFFPLSVHYQEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRP LFPEGFMNEVQVVCTVVSTNKKSDPDIAAMIGTSAALAISGIPFAGPIGAARVGFHPEIGYILNPTYEQLQSSSLDMVVAGTEDAVLMVESEADELTEDQ MLGAVLFAHDEFQAVIRAVKELAAEAGKPAWDWKAPAENTVLVNAIKAELGEAISQAYTITIKQDRYNRLGELRDQAVALFAGEEEGKFPASEVKDVFGL LEYRTVRENIVNGKPRIDGRDTRTVRPLRIEVGVLGKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGERKDAFMLHYNFPPFSVGECGRMGSPGRR EIGHGRLARRGVAAMLPTQDEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPVKAPVAGIAMGLVKEGEKFAVLTDILGDEDHLGDMDFKVAGTD KGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQVIAKPRAELSENAPTMLQMKIDSDKIRDVIGKGGATIRGICEETKASIDIEDDGSVKIYG ETKEAAEAAKLRVLAITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISQISDKRIDKVTDVLQEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASG V
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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