Strain | Pseudomonas putida HB3267, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GAATCGGCGGGGATAGCGAACTCGCCGATCGCCACCACCGGCTTGCCCGAAGGCAGCAGCCAGCTCAGCTCGAAGCAGTTCCAGTAATCCACACCCTGCC ACGGCAAGGTCTGGGCGGTAACGCCCAGCTCGGCCCACTTGGCGGTACGCGGGATCGGGAACAGCAGCTCCGGGGAATAGGTGGCAATGTATTCGCTGGA TTTGCCCAGCGGGGAATGTTCGGCAGCGGGATGCATGGAAACTGACCTGAAGGTTCGAAATTGCCCCTAGTCTACCGGTTTTGCACCCCACCTTGGAGCG CAAGTCAGCGGTATTACATCTTCGTCAGTTTGGGGCGAGCGGGTGCATCGTCACGTATCATCTCAGCATCACCCGGTCCCTGTAGGAGCGGGTTCACCCG CGAACACCGGCAAAGCCGGTGCCATGCACCGTGTTGAATTCTTCGCGGGTAAACCCGCTCCCACAGGGTTTTGTGCCGTTTGCTGGAGTCAATTCACCCA
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DNA Sequence for Gene |
>B479_08415
ATGAAACTGCTGATCGTCGAAGACCAGGCCCGGACCGGCCAGTACCTGAGCCAGGGCCTGAACGAGGCCGGCTTCGCCACCGAACTGGCCACCGACGGCG AGACCGGCCAGTTCCTCGCCCTGACCGGTGACCACGACCTGCTGATTCTCGACGTGATGCTGCCCGGCCGTGACGGCTGGCAGATCCTCCAGGCCGTGCG CCAGGCCGGCCTGGACACCCCGGTGCTGTTTCTCACCGCCCGCGATGCCGTGGAGGACCGGGTGCACGGCCTGGAGCTGGGCGCCGATGATTACCTGGTC AAGCCGTTTGCCTTCTCCGAACTGCTGGCGCGGGTGCGCAGCCTGCTGCGCCGGGGCACCAGCCCCAGCCAGGACACCACCCTGGGGCTGGCCGACCTGC GCCTGGACCTGATCCGCCGCCGCGCCGAGCGCGCCGGCCAGCGCATCGACCTGACCGCCAAGGAGTTCGCCCTGCTTGAACTGCTGCTGCGCCGCCAGGG CGAGGTGCTGCCCAAATCGCTGATCGCCTCGCAGGTGTGGGACATGAATTTCGACAGCGATACCAATGTGATCGAAGTGGCGATCCGCCGCCTGCGCCTG AAGATCGACGACCCGCACCCCAACAAGCTGATCCATACCGTACGCGGCATGGGCTATGTACTCGAAGAGCGCGCGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCGCCAGGTCTCCCTCGGCAGCCGCCTGGCCCTGCTGTTCGCCGCCTGCACCGCCGCTGTCTCGCTCGGCGCGGGCCTGATATTCAGCCGGGCCAGCGA GCAGCACTTCGTGGAACTGGACCAGCAGCTGCTGGACTCGCGCCTGTCGCTGTTCCGCACCCAGCTGGCCGGCATCTCCACCCCGGCCGAGCTGCAGGCG CGCCTGCCCGCCTTGCGCGATGAACTGGGCCACCAGGCCGACCTGGCCCTGCGCATCAACGGCAGCGACGGCGCCACCTGGTTCGAAAGCCGCACAGGCC TGCCCCGGACACCGCTGCCCGACGGGCTGGCAACCCTGCATGCGCAAGGCACCGACTACCGCAGCCTGGCCGTGCACCTGGCGCAAGGCGCCCCGCAGTC GCCACAACTGACCCTGTACCTCGACATCACCCATCACCAGCACTTCCTGCAGGGCATGCAACGGCTGATCTGGCTGACGGTGGGCCTGTCGGCGCTGGCC
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Amino Acid Sequence |
>two component heavy metal response transcriptional regulator
MKLLIVEDQARTGQYLSQGLNEAGFATELATDGETGQFLALTGDHDLLILDVMLPGRDGWQILQAVRQAGLDTPVLFLTARDAVEDRVHGLELGADDYLV KPFAFSELLARVRSLLRRGTSPSQDTTLGLADLRLDLIRRRAERAGQRIDLTAKEFALLELLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRL KIDDPHPNKLIHTVRGMGYVLEERAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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