Strain | Pseudomonas putida HB3267, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTTCTGGACGGGTGCCAAATACGGTGAGGGTCTTGAGGGGCACGGCGGTGATCCTCTTGCTGGACGGGCTGGTACGGGTGGGCCAAAAGGGGCCGGGCAG GCGCGCGGAGACTGGCCTTGTGGACGGGCCGGGAGCGAGGGCAAGCGGCGGGTGGGTGAGGGCATGCAGCTTGGGTCCTTCAAGCAAACGGCTGTCCATT GCTCAAAAAATCTAGCAGTTGGTTCATGTGATGCCAGTTGGCGTAGGGGGGGATGGTCCGCTGGAGAGTGAGGTTGTTCCTGCTCAGGCCTTGTTCACCG GAGGTTGTAGGAATGTAGGCAGGTTTTGCTGTGAATGCGGCATCGGACAAACGGGTATTCGGCTACAGGCCGTGATGCATGGCGCCAATGCTCTCGGGCT GGGGTGGTGGAGGGAAAAGGCGATTGTTTTTTGGGTTGGCGAAGTTGGCTGGGTGATTGATCGATTTGGTAACCATTCGCCGATGATGGTAGCTGTTTCG
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DNA Sequence for Gene |
>B479_07015
ATGTCGGGTTTGCCGCTAGGGTTGATTGCGCAGCTGAAGGAAACCGGCTGCTGGAAAATGACCAACCCAGGAGTATTCACCATGCGTAACAACGTTCTGT CGTACCTGCTGCTGCCGCTGTTCGCCAGCCTGTCCTTTTCCCTCAGCGCTGCCCCGGCCAGCACCACGGCGGTGGCCGAGCCGGTGCCGGTGGTAACCCA GCAGCAGGCCCAGCAGCCGCAGCGGCTGGACCTGAACACGGCTGATGCGCTTACTTTGCAGAAGGAGCTGAACGGGATAGGGAAGGCCAAGGCTGAGGCC ATAGTGGCCTACCGGGAGGCCAATGGGCCGTTTGCTTCGGTGGATGAGCTGCTGGAGATCAAGGGGATTGGTAATGCGTTGCTGGAACGTAACCGGGACA AGGTGATGGTGGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGGGAGGGGGCCGGGGGTTGTGTCCTGGCCCTGCCTTTCATGAAGATTCAATTCAGAGAACTTAATCCAAAAGCGGTCCGCGTACCCTGTGGGAGCGGC TTTAGCCGCGAAGAACCAAACGCGGTGCATGGCACCGGCTGCGCCGGTATTCGCGGCTAAAGCCGCTCCCACAGGGCCCAATGAGTTATGTATCAGCCGG TCAGACCGTGCCAGCGCCGACAGGCAGGCTAGCGGTCCTGCGCATCCTTGGCATCCGCTTCGGCATTGCGCTCATGCACCTTGCGCAGCTGTTCTTCGGT CAGTGGCAGTTTTTTTGCGGTGTCGCGCAGCAGCATCAGCCCGCCGACGATCGAGCCGAGGGCTATGATGAGTATCAGCCAGGCATACCAGGGCATTGTC GTTCTCCTTTGCTGGTGATGGGCAGCGCTTGTACAAATGTTGAGCAATTGCCCGTTCCGTTGGTTCAATTATAGGAGCCAGCCACTGCCGGGCCAATTCC
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Amino Acid Sequence |
>Helix-hairpin-helix repeat-containing competence protein ComEA
MSGLPLGLIAQLKETGCWKMTNPGVFTMRNNVLSYLLLPLFASLSFSLSAAPASTTAVAEPVPVVTQQQAQQPQRLDLNTADALTLQKELNGIGKAKAEA IVAYREANGPFASVDELLEIKGIGNALLERNRDKVMVE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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